Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02825 ATGGATTCATTTGAGCCAGAAGGAAATGGTTCGGAGGGATCGTTGCCGCCCCCACCTCCTGTTCCACCAAATGCTGTGCCAGTCATAGCTGATCAAGGACTTCCTCTTGAACCTGTCAAGAAGGTTTCCCGGGTTCCAATTGCCAGACGAGGATTGGGATCCAGAGGAAGTAAATTACCTATTTTAACTAACCACTTCAAAGTCAATGTTAAGATCAACGATGGCTATTTCTTCCACTACAGTGTAGCATTTTCTTACGAAGATGGTCGCCCTGTAGAAGGTAAGGGTGTTGGAAGAAAAATCATTGACAGGGTGCAGGAGACTTATGACTCTGAGTTAGCAGGCAAGGACTTCGCCTATGACGGGGAGAAGAGTTTGTTTACTGTTGGCCCTCTTCCCCGAAACAAGCTTGAATTCACTGTTGTTTTGGAGGATCTCACATTTAACAGGAATAATGGCAATTGCAGCCCTGATGGTCATGGGAGTCCTAATGAGAGCGACAAGAAGAGGATGCGACGCCCAAATCGTTCAAAAACATTTAAGGTGGAGATCAGTTATGCTGCTAAAATCCCTATGCAGGCTATCACTAATGCACTGCGCGGTCAAGATTCTGAAAATTTTCAAGAAGCCATCAGAGTGCTTGATATCGTATTAAGGCAACATGCCGCCAAGCAAGGGTGTTTACTGGTTCGCCAATCTTATTTTCACAATGATCCAAGGAGTTTTACTGGCGTTGGAGGTGGTGTTTTAGGGTGCAGAGGATTCCATTCAAGTTTCAGAACTACACAAAGTGGTTTATCACTTAATATAGATGTATCCACTACCATGATCGTACAGCCTGGCCCCGTAGTGGACTTTTTAATTGCCAACCAGAATGTGCGAGATCCTTTTTCAATAGACTGGGCAAAGGCCAAAAGGACGCTTAAAAATCTGAGGGTTCAGACTAGCCCAGCCAATCAAGAGTACAAGATAACTGGGCTTAGTGATCTCCCATGCAGAGAGCAGACGTTTTCTCTGAAAAGAAAAAGTGGAAAGGATGGCAGTGATGAATCGGAGGAAGTGACTGTTTATGATTATTTTGTTAATCATCGTAAGATAGAGCTCCGTTATTCTGGTGATCTTCCTTGTATCAATGTCGGGAAACCAAAACGTCCTACTTTCTTCCCACTTGAGCTCTGCTCCTTGGTGTCCCTACAACGATACACAAAATCACTCTCTACACTTCAAAGGTCTTCGCTGGTGGAGAAATCCAGGCAGAAGCCTCAAGAGAGGATGAAAGTTTTGTCTGATGCTTTAAAAAACAACAAATATGATTCTGAACCCATGCTTCATAATTGTGGGGTTTCAATAAGCAATAGCTTTACTGAAGTGGAGGGTCGCGTTTTGCAGGCTCCAAGGTTGATGTTTGGTGATCGGGAGGAGAACCCAAGAAATGGGAGATGGAACTTGAATAATAAGAAAATAGTGCAGCCATCAAGGATAGAAAAATGGGCTGTGGTGAACTTTTCTGCACGTTGTGATACACGTGGGCTTGTCCGAGATCTGATTAAATGTGGAGGAATGAAAGGAGTTCTCGTAGAAGAACCATTTTGTGTCTTCGAAGAAAAACCTCAGTTTAGACGTGACCCTCCTGTGATAAGAGTGGAGAAAATGTTTGAAGAGATCCAGTCAAAACTTCCTGGCCCCCCAAAGTTCCTTCTTTGTCTTCTTCCTGAACGGAAAAACTCTGATCTTTATGGTCCATGGAAACGGAAGAATCTTTCGGAGTTTGGAGTGGTCACTCAGTGCATAGCTCCTACAAGGGTCAATGACCAATATCTGACTAATGTTCTGATGAAGGTCAATGCTAAGCTTGGTGGTCTGAATTCAATGCTATCAATTGAACATACACCGTCAATTCCTGTTGTTTCCAAAGATCCCACCATCATTCTTGGCATGGACGTGTCACATGGATCACCAGGACAGTCTGATATCCCTTCAATTGCAGCGGTAGTCAGCTCTAGACAGTGGCCTCTGATATCGAAGTATAGGGCATGCGTCCGTACCCAGTCTCCAAAGGTTGAAATGATCGATAATTTGTTCAAGCCAGTGTCTGAGAAGGAGGATGAAGGCATTATCAGGGAACTTCTGGTTGACTTCTATGCAACATCTAAGAGAAAACCACAAAATATAATAATATTCAGGGATGGGGTAAGCGAATCGCAGTTCAATCAAGTATTGAACATTGAACTCAATCAAATCATTGAGGCCTGTAAATTTCTTGATGATCAGTGGTGTCCCAAATTTGTGGTGATTGTTGCCCAGAAAAATCACCACACAAAATTTTTCCAGCCTTTATCTCCTGACAATGTTCCCCCAGGAACCGTTATTGATAATAAAATATGCCATCCACGGAACTATGACTTTTATTTATGTGCACATGCAGGAATGATTGGAACTACCAGGCCCACGCATTACCATGTTCTGTTAGATGAGATTGGCTTCTCGCCTGATGATCTGGAGGGACTTGTGCATTCGTTATCATATGTGTATCAGCGGAGCACCACTGCCATATCTGTCGTTGCTCCTGTATGCTATGCACACTTGGCTGCAACTCAGATGGGACAGATGATCAAATTTGAAGACAAGTCTGAGACTTGTTCGAGCCATGGTGGGCTGTCATCTGCTGGACCGGTTCCTGTGCCCCAGTTGCCCAAATTGCAGGAGAACGTCCGCAACTCCATGTTCTTTTGCTGA 2736 0.4397 MDSFEPEGNGSEGSLPPPPPVPPNAVPVIADQGLPLEPVKKVSRVPIARRGLGSRGSKLPILTNHFKVNVKINDGYFFHYSVAFSYEDGRPVEGKGVGRKIIDRVQETYDSELAGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDLTFNRNNGNCSPDGHGSPNESDKKRMRRPNRSKTFKVEISYAAKIPMQAITNALRGQDSENFQEAIRVLDIVLRQHAAKQGCLLVRQSYFHNDPRSFTGVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIVQPGPVVDFLIANQNVRDPFSIDWAKAKRTLKNLRVQTSPANQEYKITGLSDLPCREQTFSLKRKSGKDGSDESEEVTVYDYFVNHRKIELRYSGDLPCINVGKPKRPTFFPLELCSLVSLQRYTKSLSTLQRSSLVEKSRQKPQERMKVLSDALKNNKYDSEPMLHNCGVSISNSFTEVEGRVLQAPRLMFGDREENPRNGRWNLNNKKIVQPSRIEKWAVVNFSARCDTRGLVRDLIKCGGMKGVLVEEPFCVFEEKPQFRRDPPVIRVEKMFEEIQSKLPGPPKFLLCLLPERKNSDLYGPWKRKNLSEFGVVTQCIAPTRVNDQYLTNVLMKVNAKLGGLNSMLSIEHTPSIPVVSKDPTIILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQSPKVEMIDNLFKPVSEKEDEGIIRELLVDFYATSKRKPQNIIIFRDGVSESQFNQVLNIELNQIIEACKFLDDQWCPKFVVIVAQKNHHTKFFQPLSPDNVPPGTVIDNKICHPRNYDFYLCAHAGMIGTTRPTHYHVLLDEIGFSPDDLEGLVHSLSYVYQRSTTAISVVAPVCYAHLAATQMGQMIKFEDKSETCSSHGGLSSAGPVPVPQLPKLQENVRNSMFFC 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02825 911 Pfam Argonaute linker 1 domain 230 278 IPR014811 -
Accr3g02825 911 CDD Piwi_ago-like 441 866 IPR045246 -
Accr3g02825 911 Gene3D - 632 911 IPR036397 GO:0003676
Accr3g02825 911 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 42 874 - -
Accr3g02825 911 ProSiteProfiles Piwi domain profile. 565 872 IPR003165 GO:0003676
Accr3g02825 911 Pfam Argonaute linker 2 domain 423 469 IPR032472 -
Accr3g02825 911 Gene3D paz domain 274 401 - -
Accr3g02825 911 MobiDBLite consensus disorder prediction 152 175 - -
Accr3g02825 911 FunFam Protein argonaute 7 275 401 - -
Accr3g02825 911 ProSiteProfiles PAZ domain profile. 305 397 IPR003100 GO:0005515
Accr3g02825 911 SUPERFAMILY PAZ domain 275 437 IPR036085 GO:0005515
Accr3g02825 911 SUPERFAMILY Ribonuclease H-like 549 870 IPR012337 -
Accr3g02825 911 FunFam Protein argonaute 3 633 911 - -
Accr3g02825 911 Gene3D - 461 626 - -
Accr3g02825 911 SMART Piwi_a_2 565 872 IPR003165 GO:0003676
Accr3g02825 911 Pfam Piwi domain 566 872 IPR003165 GO:0003676
Accr3g02825 911 SMART DUF1785_2 228 280 IPR014811 -
Accr3g02825 911 Pfam Mid domain of argonaute 475 510 IPR032473 -
Accr3g02825 911 CDD PAZ_argonaute_like 280 396 - -
Accr3g02825 911 MobiDBLite consensus disorder prediction 1 25 - -
Accr3g02825 911 Pfam N-terminal domain of argonaute 60 218 IPR032474 -
Accr3g02825 911 Pfam PAZ domain 284 413 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02825 Accr-Chr3 58847898 58855486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02825 49 911 Eukaryotic Initiation Factors Gene Family AT5G43810 35.398 6.54e-165 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02825 K11593 - qsa:O6P43_020873 1504.96