Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02812 ATGGATGTTCAAGTAATAAATGTGGAAGAAGGGACTGGTCATCGAGCTACCACCAATGATGGGGATGCAGAACCTAGTGAAGGTGAAGTTAATAATGCTGAAAACTCAGGATCTCATGTTGAGGATGGAATTCCTGAGCCATTTGTTGGCATGGAGTTTGATTCTGAAGATTCTGTGAGGACTTTCTACAATGATTATGCCAAACGTGTGGGTTTCACCACTAAAGTTGGCCAGCATGGCCGTTCTAAAGTTGACGGGGCAATCATGTATCGGGAGTACATCTGTGGCAAGGAAGGTTTAAAAAGAAGGCTAGGTGACAGTTGTGATGCAATGATTAAAGTAGAGTTAAAAGGTCAAAATAAATGGGTCATAACAAAGTTTGTGAAGGAGCATAGCCATTCCATGGTGAATCCCGGTAAGGTGCATCACCTTCGGCCGCGTAAGCATTTTTCTAGTGTTGGAAAGACCATGCCTGAAACTTACCAAGGGGTGGGACTTGTCCCAAGTGGTGTCATGTATGTATCCATGGATGGGAATTGTGCTGCTAATGAGAATATTCGTGAAGCTAAGAACACTCCTCTTGAACCCAGTCACGCAGCAAGGAATTCTACAATGATGAATAATACTGGTAGGCCTCCTATTCGAAAGAGGACATTAGGGAGAGATGCTCAGAACCTGCTGGAATATTTCAAGAAAATGCAGGCCGAGAATCCTGGTTTCTTCTATGCCATACAACTTGATGAAGAAAATCGCATGTCGAATGTATTTTGGGCCGATGCAAGATCACGGACGGCATACTGTCATTTCGGCGATGTCGTGACCCTGGACACAACATACAAAGTGAATCAATACAAAGTTCCTTTTGTTCCATTTACTGGGGTGAACCATCATGGCCAAATGATTTTGTTTGGTTGTGCACTTCTTTTGGATGATTCTGAGGCTTCTTTCTTGTGGCTCTTTAAGACTTTTTTGACAGCAATGAATGACTGCCAACCTTTTTCTATAATTACAGATCAAAACAAAGCCACTCAATCAGCAGTGTCTCAAGTTTTTCCCCAAACACGCCACTGTATAAGTAAGTGGCATGTTTTGAGAGAAGGCCAAGAAAAGTTGGCACATGTTTGTCATGCTCATCCAAACTTTCAGGTTGAACTTTATAATTGTATTAACCTAACGGAGACCATTGAGGAATTTGAGTCATCTTGGAGTTTCATCCTTGATAAATATGAGCTCAGAAGAAATGATTGGCTTCAGTCATTGTATGATGCTCGTGCTAAGTGGGTTCCAGCATATTTTCGTGATTCATTTTTCGCTGCAGTATCTCCTAATAGAGGATTTGAAAGTTCTTTTTTTGACGGTTATGTCAACCAACAGACTACATTACCAATGTTCTTTAGGGAGTATGAAAGGGCTTTAGAGAACTGGTTTGAGAAGGAAATAGAAGCAGATTTTGAAACTATCTGCACCACACCAGTTTTAAAGACACCTTCACCCATGGAAAAACAGGCTGCTAGTCTTTATACAAGAAAAGTATTTTCTCTGTTTCAAGAAGAGCTAGTTGAAACATTTGTTTATACTGCCAATAGAATTGAAGGTGATGAGGTGAATAGCACGTTCAGAGTTGCAAAATTTGAAGATGATCAAAAGGCATATGTTGTGACATTAAACCATTCAGAGTTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCAGGAATTATTTGCAGGCATGTCTTAACTGTTTTCACAGTAACCAATGTACTTCAATTACCACCCCATTACATCTTAAGACGGTGGACAAGAAATGCAAAAATTGTTGTTGGATCAGATGAACGTGCTGGTGAATTACTTGGACAGGAGTCTCTAACATCAAGATATAACAATCTATGTAGGGAAGCAATCAGATATGCTGAGGAAGGGGCAGTAGCTGTGGAAACATATAATGCTGCTTTCAATGCCCTTAAAGAAGGTGGGAAGAAGATTGCAGCTGTGAAGAAAAGTGTTTCCAAAGTTGCTCCTCCTAGCAATCAGAGTGGTGGGACTCCTTATGATGACAAAAAATCTTCTACGTCAACCTCAGATACAACCCCTCTTCTATGGCCACAGCATGATGAAATATTGAGGAGGTTTAATCTTAATGATGCTGGTGCTCCTGTTCAATCGGTTGCTGATCTAAATTTGCCACGAATGGCTCCTGTTTCCCTTCAGAGAGATGATGGTCCATCTGACAGCATGGTATGTAGAAAGGTGGTTCTCCCCCATCTGAAATCAATGACTTGGGTAATGGAGAACAAAAATTCAACTCCTGGGAACAAAGTAGCTGTTATCAATTTGAAGTTGCAAGATTACAGCAGGACTCCATCAGCAGAATCTGAGGTTAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCGATGTTGAAGTCTATGGCCTACATTAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAGTCTGAAGTAAAGTTTCAGGTGTCCAGGGATACATTGGGTGCCATGTTACGATCAATGGCTTATATTCGTGAGCAACTTTCTCATGCTGGAGACATGCAGTCAGAGCCTGTATGGAAAAGGCAACGAAAATAA 2652 0.4103 MDVQVINVEEGTGHRATTNDGDAEPSEGEVNNAENSGSHVEDGIPEPFVGMEFDSEDSVRTFYNDYAKRVGFTTKVGQHGRSKVDGAIMYREYICGKEGLKRRLGDSCDAMIKVELKGQNKWVITKFVKEHSHSMVNPGKVHHLRPRKHFSSVGKTMPETYQGVGLVPSGVMYVSMDGNCAANENIREAKNTPLEPSHAARNSTMMNNTGRPPIRKRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENRMSNVFWADARSRTAYCHFGDVVTLDTTYKVNQYKVPFVPFTGVNHHGQMILFGCALLLDDSEASFLWLFKTFLTAMNDCQPFSIITDQNKATQSAVSQVFPQTRHCISKWHVLREGQEKLAHVCHAHPNFQVELYNCINLTETIEEFESSWSFILDKYELRRNDWLQSLYDARAKWVPAYFRDSFFAAVSPNRGFESSFFDGYVNQQTTLPMFFREYERALENWFEKEIEADFETICTTPVLKTPSPMEKQAASLYTRKVFSLFQEELVETFVYTANRIEGDEVNSTFRVAKFEDDQKAYVVTLNHSELRANCSCQMFEYSGIICRHVLTVFTVTNVLQLPPHYILRRWTRNAKIVVGSDERAGELLGQESLTSRYNNLCREAIRYAEEGAVAVETYNAAFNALKEGGKKIAAVKKSVSKVAPPSNQSGGTPYDDKKSSTSTSDTTPLLWPQHDEILRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPSDSMVCRKVVLPHLKSMTWVMENKNSTPGNKVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLKSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHAGDMQSEPVWKRQRK 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02812 883 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Accr3g02812 883 SMART 26again6 562 589 IPR006564 GO:0008270
Accr3g02812 883 MobiDBLite consensus disorder prediction 196 211 - -
Accr3g02812 883 Pfam SWIM zinc finger 551 585 IPR007527 GO:0008270
Accr3g02812 883 MobiDBLite consensus disorder prediction 671 699 - -
Accr3g02812 883 MobiDBLite consensus disorder prediction 1 41 - -
Accr3g02812 883 MobiDBLite consensus disorder prediction 668 699 - -
Accr3g02812 883 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
Accr3g02812 883 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 663 IPR031052 GO:0006355
Accr3g02812 883 Pfam MULE transposase domain 272 364 IPR018289 -
Accr3g02812 883 MobiDBLite consensus disorder prediction 194 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02812 Accr-Chr3 58676208 58680839 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Accr3g02812 MULE 3.8e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02812 - - gmx:100786516 1409.82