Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02810 ATGAGTGCACTATTGAAGGGCTTGAGGCTTCTAAATAGAGCAGACCCCTTTGTTGAGGTCACTGTATCTGCAAGAGGAGAACATGTCTTAGCTGCAGCAGGAGAAGTTCATCTTGAAAGATGTGTAAAAGATTTAAAGGAAAGATTTTCTAAGGTAAGCTTACAAGTCTCTCCACCTCTTGTGTCTTACAAAGAGACCATTGAAGGAGAAGTGTCTAGCATGCTTGAAAATTTGAAAGCTAGTAAGAACTCTGATTATGTTGAAAAAACAACACCAAATGGTAGATGTGTTGTACGTGTGCATGTGATGAAACTTCCATCTTCTTTAACAAAGGTACTTGATGATAGTTCTGATGTATTGGGGGATGCCATTGGATTAAAGTCTGGTAAAAATTTGGATTCTCAAAGATCAGGTATCCTTAAAAATGATAATCCAACTGAAGTGCTAAAAAAACGCATAATGGATGCTTTGGAAAGTGAGATTTTGAGCAAGAATGAGAATGACAAGGATTATGTTGACAAATGTAAATCAAAGTGGTTAAACCTTTTGAGAAGGATATGGGCACTTGGACCTAGGCAAATTGGTCCCAACATTCTCTTTACTCCTGATATAAAAGCAGAGAGTAGTGATAGCTCTATTCTAATACATGGTGATTGTCATGTATCTGAAAGACTGGGTTTTGCTGATGATTCTAGTACTTCTAATACGCTAGCTGATATACCATCAAATGTGAATGAGTCATTAAACAAGGAGGCTAAGCGTCTTGAGAGTAGTGTCATATCTGGGTTCCAACTGGCCACTGCAGCCGGACCCTTGTGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAAGCATACATATATCCCTATTTAGGGCAGTATAATGAATCAGAACCACACCAACAATCTGAGCAATATGGCATCTTTGCAGGACAAATAATCACAACCGTCAAGGATGCTTGTAGAGCAGCTGTGCTTCAGAATAGGCCACGGCTTGTGGAAGCCATGTACTTCTGTGAGTTGAATACTCCTACTGAATATTTGGGTGCCATGTATGCTGTACTTGCCCGAAGACGGGCCCGAATTTTAAAGGAAGAGATGCAGGAAAGTTCCCCTTTCTTCACTGTGCATGCATATGTGCCTGTTTCTGAAACTTTTGGTTTTGCGGAAGAGCTTAGGAGGGGGACTTCTGGAGCTGCTAGTGCGCTTCTTGTACTTAGTCACTGGGAAGAACTATCTGAGGATCCTTTCTTTGTACCTAAAACTGAAGATGAAATTGAAGAGTTTGGAGACGGCTCTAGTGTGCTTCCTAATACCGCAAGAAAGTTAATTAATGCGGTCAGACGCGGTAAGGGACTTCATGTGGAGGAAAAAATAGTACAACATGGAACAAAGCAGAGGACACTAGCTCGTAAAGTCTGA 1425 0.4091 MSALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCVKDLKERFSKVSLQVSPPLVSYKETIEGEVSSMLENLKASKNSDYVEKTTPNGRCVVRVHVMKLPSSLTKVLDDSSDVLGDAIGLKSGKNLDSQRSGILKNDNPTEVLKKRIMDALESEILSKNENDKDYVDKCKSKWLNLLRRIWALGPRQIGPNILFTPDIKAESSDSSILIHGDCHVSERLGFADDSSTSNTLADIPSNVNESLNKEAKRLESSVISGFQLATAAGPLCDEPMWGLAFVIEAYIYPYLGQYNESEPHQQSEQYGIFAGQIITTVKDACRAAVLQNRPRLVEAMYFCELNTPTEYLGAMYAVLARRRARILKEEMQESSPFFTVHAYVPVSETFGFAEELRRGTSGAASALLVLSHWEELSEDPFFVPKTEDEIEEFGDGSSVLPNTARKLINAVRRGKGLHVEEKIVQHGTKQRTLARKV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02810 474 Gene3D - 331 465 - -
Accr3g02810 474 SUPERFAMILY EF-G C-terminal domain-like 335 433 IPR035647 -
Accr3g02810 474 Pfam Elongation factor G C-terminus 333 417 IPR000640 -
Accr3g02810 474 Gene3D Elongation Factor G (Translational Gtpase), domain 3 1 62 - -
Accr3g02810 474 SUPERFAMILY EF-G C-terminal domain-like 3 59 IPR035647 -
Accr3g02810 474 SMART EFG_C_a 332 421 IPR000640 -
Accr3g02810 474 SUPERFAMILY Ribosomal protein S5 domain 2-like 61 334 IPR020568 -
Accr3g02810 474 FunFam Translation elongation factor 2 1 62 - -
Accr3g02810 474 Gene3D - 81 329 IPR014721 -
Accr3g02810 474 CDD aeEF2_snRNP_like_IV 58 339 - -
Accr3g02810 474 CDD eEF2_snRNP_like_C 335 413 - -
Accr3g02810 474 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 473 - -
Accr3g02810 474 FunFam Elongation factor like GTPase 1 331 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02810 Accr-Chr3 58656320 58657744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02810 1 474 Eukaryotic Initiation Factors Gene Family AT3G22980 66.875 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02810 K14536 - pvu:PHAVU_003G003900g 750.74