Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02809 ATGGAGGATGCTTTTGATCCTCAGAAGATCAGAAACATATGTATTTTGGCACATGTCGATCATGGAAAGACCACACTAGCTGATCATTTGATTGCTGCTTCAGGGGGTGGCCTACTTCACCCGAAGTTGGCTGGACGAGTTAGGTTCATGGACTATCTTGATGAGGAGCAGAGGAGAGCCATCACCATGAAGAGCTCTTCCATTGGTCTTCATTATAAAGACTACTCTATTAACCTCATAGATTCCCCAGGTCATATGGACTTTTGTAGTGAGGTGTCCACAGCTGCTAGATTAAGTGATGGTGCATTAATTTTGGTTGATGCTGTTGAGGGTGTGCATATTCAAACCCATGCTGTGTTGCGGCAGTGTTGGATTGAGAAGCTCTCTCCTTGCTTGGTTCTTAATAAGATTGATAGGTTGATTAGTGAATTGAAGTTGAGTCCCATGGAAGCCTATATTCGGTTATTACGGATTGTGCATGAGGTCAATGGGATAGTTAGTACATATAAGTCTGAGAAGTATTTGTCAGATGTAGATTCCATACTTGCAGGACCTTCAGGCGATGTCACTGCTGATGGAAACATTGACCTCATAGAGGACGATGAAGAAGATATGTTTCAACCGCAGAAAGGGAATGTGGCATTTGTCTGTGCACTAGATGGTTGGGGATTCGGAATTCACGAATTTGCTGAAATTTATGCTTCAAAATTGGGGGCTAGTGCTGCTGCATTGCAAAAGGCCCTATGGGGTCCTCGTTATTACAATTCAAAAACTAAAATGATTGTTGGTAAAAAGGGTATAGGTGGAGGAAGTAAGGCAAGGCCAATGTTTGTCCAATTTGTTCTAGAACCATTATGGCAGGTATACCAAGGTGCTCTAGAGGATGGTGGTGACAAAGGAATGCTTGAGAAAGTCATTAAGTCGTTTAGTTTGTCTATACCATCTCGTGAATTGCAAAATAAAGACCCTAAGCTTGTGCTTCTAGCTGTTATGAGTAGGTGGCTTCCCCTTTCTGATACAATCTTATCAATGGTGGTGAAGTGTATGCCAGATCCAGTATCTGCACAATCATTTCGTATCTCACGTCTTATTCCAAAAAGAGTGGTTCTTGATAATGGGGTTGATCAGAATGTGCTTGCAGAGGCAGAGCTTGTCAGAAAATCAGTTGAGTCGTGTGATTTGAAACCTGAAGCTCCATGTGTTGCTTTTGTGTCAAAAATGTTTGCCGTGCCGATTAAAATGCTTCCTGATAGGGGTTCACACGGGGAGGTCATGAACTATTCTGGTGAAGGAGAGGGTGAATTAGATGAGTGTTTCTTGGCATTTGCTAGAATATTTAGTGGAACTTTGTCTGCAAGACAAAAAGTTTTTGTGCTTTCAGCTTTGTATGATCCACTAAAAGGAGAACAAATGCAAAAGCATGTTCAAGAGGCTGAATTACAATCTTTGTATCTAATGATGGGCCAAGGCTTGAAGGTAGTGACATCGGCTAAAGCAGGAAATATTGTTGCTATCCGAGGCCTCGGCCAACATATCCTGAAAAGTGCTACACTCTCATCTAGCAAGAATTCTTGGCCCTTTTCTAATATGTCTTTCCAGGTGACCCCAACTTTAAGAGTTGCTATTGAGCCATCTGACCCTGCAGAAATGAGTGCACTATTGAAGGGCTTGAGGCTTCTAAATAGAGCAGACCCCTTTGTTGAGGTCACTGTATCTGCAAGAGGAGAACATGTCTTAGCTGCAGCAGGAGAAGTTCATCTTGAAAGATGTGTAAAAGATTTAAAGGAAAGATTTTCTAAGGTAAGCTTACAAGTCTCTCCACCTCTTGTGTCTTACAAAGAGACCATTGAAGGAGAAGTGTCTAGCATGCTTGAAAATTTGAAAGCTAGTAAGAACTCTGATTATGTTGAAAAAACAACACCAAATGGTAGATGTGTTGTACGTGTGCATGTGATGAAACTTCCATCTTCTTTAACAAAGGTACTTGATGATAGTTCTGATGTATTGGGGGATGCCATTGGATTAAAGTCTGGTAAAAATTTGGATTCTCAAAGATCAGGTATCCTTAAAAATGATAATCCAACTGAAGTGCTAAAAAAACGCATAATGGATGCTTTGGAAAGTGAGATTTTGAGCAAGAATGAGAATGACAAGGATTATGTTGACAAATGTAAATCAAAGTGGTTAAACCTTTTGAGAAGGATATGGGCACTTGGACCTAGGCAAATTGGTCCCAACATTCTCTTTACTCCTGATATAAAAGCAGAGAGTAGTGATAGCTCTATTCTAATACATGGTGATTGTCATGTATCTGAAAGACTGGGTTTTGCTGATGATTCTAGTACTTCTAATACGCTAGCTGATATACCATCAAATGTGAATGAGTCATTAAACAAGGAGGCTAAGCGTCTTGAGAGTAGTGTCATATCTGGGTTCCAACTGGCCACTGCAGCCGGACCCTTGTGTGATGAACCTATGTGGGGTTTGGCATTTGTCATTGAAGCATACATATATCCCTATTTAGGGCAGTATAATGAATCAGAACCACACCAACAATCTGAGCAATATGGCATCTTTGCAGGACAAATAATCACAACCGTCAAGGATGCTTGTAGAGCAGCTGTGCTTCAGAATAGGCCACGGCTTGTGGAAGCCATGTACTTCTGTGAGTTGAATACTCCTACTGAATATTTGGGTGCCATGTATGCTGTACTTGCCCGAAGACGGGCCCGAATTTTAAAGGAAGAGATGCAGGAAAGTTCCCCTTTCTTCACTGTGCATGCATATGTGCCTGTTTCTGAAACTTTTGGTTTTGCGGAAGAGCTTAGGAGGGGGACTTCTGGAGCTGCTAGTGCGCTTCTTGTACTTAGTCACTGGGAAGAACTATCTGAGGATCCTTTCTTTGTACCTAAAACTGAAGATGAAATTGAAGAGTTTGGAGACGGCTCTAGTGTGCTTCCTAATACCGCAAGAAAGTTAATTAATGCGGTCAGACGCGGTAAGGGACTTCATGTGGAGGAAAAAATAGTACAACATGGAACAAAGCAGAGGACACTAGCTCGTAAAGTCTGA 3072 0.416 MEDAFDPQKIRNICILAHVDHGKTTLADHLIAASGGGLLHPKLAGRVRFMDYLDEEQRRAITMKSSSIGLHYKDYSINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQCWIEKLSPCLVLNKIDRLISELKLSPMEAYIRLLRIVHEVNGIVSTYKSEKYLSDVDSILAGPSGDVTADGNIDLIEDDEEDMFQPQKGNVAFVCALDGWGFGIHEFAEIYASKLGASAAALQKALWGPRYYNSKTKMIVGKKGIGGGSKARPMFVQFVLEPLWQVYQGALEDGGDKGMLEKVIKSFSLSIPSRELQNKDPKLVLLAVMSRWLPLSDTILSMVVKCMPDPVSAQSFRISRLIPKRVVLDNGVDQNVLAEAELVRKSVESCDLKPEAPCVAFVSKMFAVPIKMLPDRGSHGEVMNYSGEGEGELDECFLAFARIFSGTLSARQKVFVLSALYDPLKGEQMQKHVQEAELQSLYLMMGQGLKVVTSAKAGNIVAIRGLGQHILKSATLSSSKNSWPFSNMSFQVTPTLRVAIEPSDPAEMSALLKGLRLLNRADPFVEVTVSARGEHVLAAAGEVHLERCVKDLKERFSKVSLQVSPPLVSYKETIEGEVSSMLENLKASKNSDYVEKTTPNGRCVVRVHVMKLPSSLTKVLDDSSDVLGDAIGLKSGKNLDSQRSGILKNDNPTEVLKKRIMDALESEILSKNENDKDYVDKCKSKWLNLLRRIWALGPRQIGPNILFTPDIKAESSDSSILIHGDCHVSERLGFADDSSTSNTLADIPSNVNESLNKEAKRLESSVISGFQLATAAGPLCDEPMWGLAFVIEAYIYPYLGQYNESEPHQQSEQYGIFAGQIITTVKDACRAAVLQNRPRLVEAMYFCELNTPTEYLGAMYAVLARRRARILKEEMQESSPFFTVHAYVPVSETFGFAEELRRGTSGAASALLVLSHWEELSEDPFFVPKTEDEIEEFGDGSSVLPNTARKLINAVRRGKGLHVEEKIVQHGTKQRTLARKV 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02809 1023 CDD EF2 11 234 - -
Accr3g02809 1023 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 7 1022 - -
Accr3g02809 1023 FunFam Translation elongation factor 2 535 611 - -
Accr3g02809 1023 Gene3D Elongation Factor G (Translational Gtpase), domain 3 535 611 - -
Accr3g02809 1023 SUPERFAMILY EF-G C-terminal domain-like 534 608 IPR035647 -
Accr3g02809 1023 Gene3D - 880 1014 - -
Accr3g02809 1023 Pfam Elongation factor Tu domain 2 440 518 IPR004161 GO:0005525
Accr3g02809 1023 Gene3D - 2 204 IPR027417 -
Accr3g02809 1023 Gene3D Translation factors 352 533 - -
Accr3g02809 1023 PRINTS GTP-binding elongation factor signature 130 139 IPR000795 GO:0003924|GO:0005525
Accr3g02809 1023 PRINTS GTP-binding elongation factor signature 12 25 IPR000795 GO:0003924|GO:0005525
Accr3g02809 1023 PRINTS GTP-binding elongation factor signature 78 88 IPR000795 GO:0003924|GO:0005525
Accr3g02809 1023 PRINTS GTP-binding elongation factor signature 94 105 IPR000795 GO:0003924|GO:0005525
Accr3g02809 1023 PRINTS GTP-binding elongation factor signature 58 66 IPR000795 GO:0003924|GO:0005525
Accr3g02809 1023 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 350 IPR027417 -
Accr3g02809 1023 Gene3D - 630 878 IPR014721 -
Accr3g02809 1023 Pfam Elongation factor G C-terminus 882 966 IPR000640 -
Accr3g02809 1023 NCBIfam small GTP-binding protein domain 9 140 IPR005225 GO:0005525
Accr3g02809 1023 SUPERFAMILY EF-G C-terminal domain-like 884 981 IPR035647 -
Accr3g02809 1023 CDD EF2_II 399 521 - -
Accr3g02809 1023 Gene3D Yeast translation eEF2 (G' domain) 226 335 - -
Accr3g02809 1023 FunFam Elongation factor like GTPase 1 880 1015 - -
Accr3g02809 1023 Pfam Elongation factor Tu GTP binding domain 9 349 IPR000795 GO:0003924|GO:0005525
Accr3g02809 1023 SMART EFG_C_a 881 970 IPR000640 -
Accr3g02809 1023 SUPERFAMILY Translation proteins 390 529 IPR009000 -
Accr3g02809 1023 FunFam Elongation factor like GTPase 1 226 335 - -
Accr3g02809 1023 CDD EF2_snRNP_III 536 607 - -
Accr3g02809 1023 SUPERFAMILY Ribosomal protein S5 domain 2-like 610 883 IPR020568 -
Accr3g02809 1023 CDD eEF2_snRNP_like_C 884 962 - -
Accr3g02809 1023 CDD aeEF2_snRNP_like_IV 607 888 - -
Accr3g02809 1023 FunFam Elongation factor 2-like protein 1 214 - -
Accr3g02809 1023 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 8 242 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02809 Accr-Chr3 58656320 58659391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02809 3 1023 Eukaryotic Initiation Factors Gene Family AT3G22980 71.553 0.0 1508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02809 K14536 - cave:132164150 1603.57