LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr3g02804	ATGGATCACTCCCAAATAACAACTATTGAAGACATTGACATAAGTGGAAGTTTAGTAAATGTAGATGACATTGTTGATTTGGAGAAAGACGATGATGAATGGCGAGAACATGATCAGTGTCAAATCATGGAGGATGAAGATGGTGATGATAGTGTACAAGAAATTGTGGGAGATGATGATAGTGGATTCAGTGAGGCACCTATTTTAGGGAGAGTGTTTAAGATAGCAGAAGAAGCTTATGGTTTCTATAATGATTATGCACAAGGTAAAGGATTTGGAACACGTAAGCAATATACTAGCAGGAATATGAAAACACAGCAAATATATAGGTGGAATTATGTGTGCTCAAAGCAAGGTGTCAAGAAACATAATCATAAAACAGTTGGTGATCACATTGTCAAAAGGCGTAGGGACTCAAGGACAAATTGTTCAGCGATGTTACAAGTAAAGTTAGTGGATGGATTATGGATCATAGAGAAGTTTAATGATGAACATAATCATCCATTGATTATGACTCCTTCAAAGGTGAAGAAGTTTCCTTCTCACGGTGATTTACGACGCTCAAATTTCATTAAATCACTTGTTACTAAGCTTTTCGAGGAGGGCTTAAAATCTTCAAAAATTTCAAAGGTGGTGAATGCTATAAACAAAGAAGTTAATATTACTCCTATTTAA	675	0.3541	MDHSQITTIEDIDISGSLVNVDDIVDLEKDDDEWREHDQCQIMEDEDGDDSVQEIVGDDDSGFSEAPILGRVFKIAEEAYGFYNDYAQGKGFGTRKQYTSRNMKTQQIYRWNYVCSKQGVKKHNHKTVGDHIVKRRRDSRTNCSAMLQVKLVDGLWIIEKFNDEHNHPLIMTPSKVKKFPSHGDLRRSNFIKSLVTKLFEEGLKSSKISKVVNAINKEVNITPI	224

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr3g02804	224	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	15	185	-	-
	Accr3g02804	224	Pfam	FAR1 DNA-binding domain	82	170	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr3g02804	Accr-Chr3	58562959	58563633	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Accr3g02804		FAR1	5.9e-23	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr3g02804	-		-	lsv:128132276	148.288