Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02776 ATGTCGGATGACATGCTTGTGCATTTCTCGTCCAACTCCTCCAACCAATCGGATCAGTCCTTGCCTACTAAGATTGCAAAGCTTGAAGCTCGAATGGTAGGCAAGGCTTCGTCTACAGTTACCACCACTCTGTCATCTGCCCAGCAGTCAACTTGGTCTTCTGTTCCTTCAGCTGCGAAATTTGGCGGACCTGCCGAGGATTTGGTTGGACCCTCCACTTCGAGTGATTCCGATGATGATAATGGTGGGGAATTCCTTATACAAGCTAACACACAGAAGCGCCAAAAACTTCAAGAAGATGACCACTCAAAGATTTTTGAACATGTTGAGAAATTTGCATACCAGGTGGTTACTGATGGAAGGCAAACTAGTTTGGATGTTGGGGAAGCAAAAGTTAGTGCTGATGTGAATAGGAAAAAAAATGGTCGTGGAAGGGGGAATTCTGGTTCAGGTAGGGGACGTGGTTCCAGAGTTACTGATCAAACCAGAACACAATTTTCTCCTCCAGCAGTTTTGGCCTCCAATGGTCAGCTCGACATTGCATGCCATAGAGAGGGAAGACTCAAAGATCAGATTCGCAATGACAGTTGCACTTCATTAGAGGAGGAGAATGAATCTTTACGTGCAAAAGTTGTTGCCATGGAGGAGGACCTGCGGAAAGCAAAACAAGAGATGTCTGATTATCAGAACCTTAGTCACCAGTTAGAAAAGGAGCTAAAGGACCTGAAAGATCATGAACAGCAAATGAAGCCTAAGAGGACAAAAATAATATCTGATCTGCTGATATCAGTTTCAAAGTCTGAGAGACAAGAAGCAAGGTTGAAAGTACGACAAGACTCGTTGAGACTGGGAAATGTTGGTGTAATCAGAGCTGGAACTCTCATATCCGAGACTTGGGAAGATGGGCAAGCATTGAAGGATCTTAACACCCAACTTAAACAACTGATAGAAACAAAGGAGGCTATTGAGCGGCAGCGCAAGTTGTTGAAGAAAAAACAATCTGATAAAGGTGAGGGAGCAGATGCAGATACTGTTTTACAAGAAGATGAAGTCATCATTCAGGATGAAATCTACAAGTCTCGATTAGCTAGCATTAAACGTGAGGAAGAAGTTATTATGCGGGAGAGGGATCGCTATGAGCTAGAAAAGGGTAGACTAATACGTGAGATGAAACGCATACGAGATGAGGATGGTTCTCGTTTTAACAACTTTCAGATTCTGAACCATCGATATGCCCTGTTAAATCTTCTTGGAAAAGGGGGATTCAGTGAGGTTTACAAGGCTTTTGACTTGGTGGAGCATAGATACGTTGCATGTAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAGAGTTACATTCGGCATGCAATTCGGGAGTATAATATCCACAAGACTTTGGTACATCATCACATTGTTCGTTTGTGGGACATCTTTGAGATAGATCACAATACATTCTGCACCGTTTTAGAGTATTGCAGTGGGAAGGATCTTGATGCTGTCCTTAAGGCGACACCTATATTGCCTGAGAGAGAGGCTAGGCTTGGCATTGCCAAAGTGACTGATTTCGGTCTCAGCAAAATAGTTGATGATGATGTGGGATCCCAGGGTATGGAACTAACATCTCAGGGGGCTGGAACTTACTGGTACTTGCCTCCGGAATGCTTTGAGCTCAGCAGGACACCTCTTATATCATCAAAGGTTGATGTCTGGTCTGTTGGTGTTTTGTTCTATCAAATGCTCTTTGGAAGACGCCCATTTGGCCATGACCAAACTCAAGAGCGTATACTACGTGAAGATACAATTATCAAAGCTCGCAAGGTTGAGTTCCCTACTAGACCTACGGTTTCTAATGAGGCAAAGGATTTTATACGGCGATGTCTGACGTATAACCAGGCTGAGAGACCAGATGTATTGACCATTGCTCAAGATCCATATCTTACCTACTCAAAGAAGTAA 1968 0.435 MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASSTVTTTLSSAQQSTWSSVPSAAKFGGPAEDLVGPSTSSDSDDDNGGEFLIQANTQKRQKLQEDDHSKIFEHVEKFAYQVVTDGRQTSLDVGEAKVSADVNRKKNGRGRGNSGSGRGRGSRVTDQTRTQFSPPAVLASNGQLDIACHREGRLKDQIRNDSCTSLEEENESLRAKVVAMEEDLRKAKQEMSDYQNLSHQLEKELKDLKDHEQQMKPKRTKIISDLLISVSKSERQEARLKVRQDSLRLGNVGVIRAGTLISETWEDGQALKDLNTQLKQLIETKEAIERQRKLLKKKQSDKGEGADADTVLQEDEVIIQDEIYKSRLASIKREEEVIMRERDRYELEKGRLIREMKRIRDEDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHHHIVRLWDIFEIDHNTFCTVLEYCSGKDLDAVLKATPILPEREARLGIAKVTDFGLSKIVDDDVGSQGMELTSQGAGTYWYLPPECFELSRTPLISSKVDVWSVGVLFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPTRPTVSNEAKDFIRRCLTYNQAERPDVLTIAQDPYLTYSKK 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02776 655 SUPERFAMILY Protein kinase-like (PK-like) 401 651 IPR011009 -
Accr3g02776 655 Coils Coil 362 396 - -
Accr3g02776 655 Gene3D Transferase(Phosphotransferase) domain 1 402 519 - -
Accr3g02776 655 PANTHER MIXED LINEAGE PROTEIN KINASE 11 518 - -
Accr3g02776 655 ProSiteProfiles Protein kinase domain profile. 411 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02776 655 MobiDBLite consensus disorder prediction 70 84 - -
Accr3g02776 655 MobiDBLite consensus disorder prediction 152 166 - -
Accr3g02776 655 MobiDBLite consensus disorder prediction 40 84 - -
Accr3g02776 655 Pfam Protein kinase domain 521 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02776 655 Pfam Protein kinase domain 412 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02776 655 MobiDBLite consensus disorder prediction 1 23 - -
Accr3g02776 655 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Accr3g02776 655 Coils Coil 197 248 - -
Accr3g02776 655 MobiDBLite consensus disorder prediction 40 57 - -
Accr3g02776 655 Gene3D Transferase(Phosphotransferase) domain 1 520 655 - -
Accr3g02776 655 CDD STKc_TLK 410 649 - -
Accr3g02776 655 Coils Coil 305 335 - -
Accr3g02776 655 MobiDBLite consensus disorder prediction 126 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02776 Accr-Chr3 57832573 57844320 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02776 401 646 EF-hand Containing Proteins AT2G17890 29.310 2.51e-17 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Accr3g02776 Pkinase 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02776 K08864 - gmx:100805168 1030.78