Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02711 ATGAAGGTGGAAGGAGAGAGTAGGAGGAAGACAAATCAGAGTGAAGATGAGATGGGCATAAGGAAGGGTCCCTGGACTGTGGAAGAAGACGCCATTCTGGTCAATTACATCACCATCCACGGCGAAGGTCGCTGGAATTCCGTCGCCCGCAGTGCCGGTTTGAAGAGAACGGGCAGGAGTTGCAGGTTAAGGTGGCTAAACTACTTGCGTCCGGATGTTAGGCGTGGAAATATCACGCTGCAGGAACAGATAGTAATTCTTGATCTACACTCTCGATGGGGAAACAGGTGGTCTAAAATAGCGCAGCACTTGCCAGGGAGAACGGACAATGAGATTAAGAATTATTGGAGGACGCGGGTGACGAAGCAGGCGAAGCAGCTCAAGTGCGATGTGAACAGCGAGCAGTTCAGAGACACCATGCGTTACGTGTTGATGCCCTGCTTGCTGGAGCGGATGCGGGCCTCCGAATCTGAATACAACCCGAACAGGCAACCCATCCCCGCCGACCCGAATCACTCCTCTGTCACGCCTCGCAATATCCAGTTCCACCAAGCCCCGTCTTCTCATTGGCAGGCTCATCATGTTTCGGACGGTTCCCAACGCGGGTTGGGAATCTGCCCGCCGGCTGTATCGGAACAGGGAAATAGTGACTCGGGCGGGGATAGCGGGGAGTGGGCTGAGACATTGTGGAGCGATGATAATATTTGGTTTTTGCAGCAACTTTTCGAAGATCCGTAA 738 0.5325 MKVEGESRRKTNQSEDEMGIRKGPWTVEEDAILVNYITIHGEGRWNSVARSAGLKRTGRSCRLRWLNYLRPDVRRGNITLQEQIVILDLHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVTKQAKQLKCDVNSEQFRDTMRYVLMPCLLERMRASESEYNPNRQPIPADPNHSSVTPRNIQFHQAPSSHWQAHHVSDGSQRGLGICPPAVSEQGNSDSGGDSGEWAETLWSDDNIWFLQQLFEDP 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02711 245 SMART sant 74 122 IPR001005 -
Accr3g02711 245 SMART sant 21 71 IPR001005 -
Accr3g02711 245 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Accr3g02711 245 MobiDBLite consensus disorder prediction 1 20 - -
Accr3g02711 245 CDD SANT 24 69 IPR001005 -
Accr3g02711 245 MobiDBLite consensus disorder prediction 194 225 - -
Accr3g02711 245 SUPERFAMILY Homeodomain-like 18 116 IPR009057 -
Accr3g02711 245 FunFam MYB transcription factor 79 142 - -
Accr3g02711 245 Gene3D - 78 141 - -
Accr3g02711 245 MobiDBLite consensus disorder prediction 158 178 - -
Accr3g02711 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 124 IPR017930 -
Accr3g02711 245 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 188 IPR044676 GO:0003700|GO:0006355|GO:0043565
Accr3g02711 245 FunFam Myb transcription factor 22 74 - -
Accr3g02711 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 73 IPR017930 -
Accr3g02711 245 Gene3D - 22 74 - -
Accr3g02711 245 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Accr3g02711 245 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Accr3g02711 245 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Accr3g02711 245 CDD SANT 79 118 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02711 Accr-Chr3 56793463 56794428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02711 15 242 MYB Transcription Factor Family AT2G47190 53.937 5.95e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g02711 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02711 K09422 - gmx:778065 284.648