Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02668 ATGGCGGATTCGGATAACGAATCGGGTGGGGTGAACGGCGGCAACGCGAACAGCGATTTTTCGACGAAGGAGCAGGATAGGTTTTTGCCGATAGCGAACGTGAGTAGGATAATGAAAAAGGCGTTGCCGGCGAACGCGAAAATCTCGAAGGACGCGAAGGAGACGGTGCAGGAGTGTGTGTCGGAGTTTATTAGCTTTGTGACAGGGGAGGCGTCGGACAAGTGCCAGAGGGAGAAGAGGAAGACGATCAACGGCGACGATTTGCTCTGGGCCATGACCACTTTAGGATTCGAGGATTATGTGGAGCCCTTAAAGATTTACCTACAGAAGTATCGGGAGATGGAAGGGGATAAGACTTCCCTTGGGAGGCACGGCGAGAAGGACGGTGGCGGCTCCGGCGGAAGTGGGGTTGTTGGGTTTAATGGCGCAGATGGTATGTACGGTGGGATGACGATAGGGCATCATCAGGGACAGGTGTACGGTTCTGGTGGGTTTAATCCAGGCAACGGTGGTGGTGGGGGCTCCAATATGAGATCCAGGTAG 543 0.5433 MADSDNESGGVNGGNANSDFSTKEQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKIYLQKYREMEGDKTSLGRHGEKDGGGSGGSGVVGFNGADGMYGGMTIGHHQGQVYGSGGFNPGNGGGGGSNMRSR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02668 180 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 11 123 IPR027113 GO:0001228|GO:0006355|GO:0016602
Accr3g02668 180 FunFam Nuclear transcription factor Y subunit B-3 17 137 - -
Accr3g02668 180 ProSitePatterns NF-YB/HAP3 subunit signature. 59 75 IPR003956 GO:0005634|GO:0006355|GO:0043565
Accr3g02668 180 MobiDBLite consensus disorder prediction 158 180 - -
Accr3g02668 180 Gene3D Histone, subunit A 17 136 IPR009072 GO:0046982
Accr3g02668 180 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 28 92 IPR003958 -
Accr3g02668 180 SUPERFAMILY Histone-fold 25 128 IPR009072 GO:0046982
Accr3g02668 180 PRINTS CCAAT-binding transcription factor subunit A signature 75 93 - -
Accr3g02668 180 PRINTS CCAAT-binding transcription factor subunit A signature 56 74 - -
Accr3g02668 180 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Accr3g02668 180 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02668 Accr-Chr3 55246204 55246746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02668 1 155 CCAAT-HAP3 Transcription Factor Family AT4G14540 78.125 3.47e-76 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Accr3g02668 CBFD_NFYB_HMF 1.6e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02668 K08065 - qsa:O6P43_020714 243.817