Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02628 ATGGGCCTCTCAAGTCTGCCAGCTCCATCTGAAGGAGTACTGTGTGTGCTTCTTGTTAATACTGCATTTTCCATCTCCTTAGTTAAAGGCATCGTTAGAACAATCCTTCACATTGTTGGCATCAGTCTTTCATCATCACCCACTACTCCATCGCCATCACCATCACCAGCACCAGCATCATCAGAATCTTCCCCTTCTCCAGATATCTCTCACAACCTGCCAGATTCGTTCCAAGTCGACCTCTGTTCACCGGAGAATTACATCGAAGAGTTCAGAAGCCGGACACCAACAATCCGGTTTGACACCGTGTGTGGCTGCAAACAATCTGTAGAACATGACTGCTCTGTTTGTCTGAGTCAATTTGAACCAGAGTCTGAGATAAACCGTTTGTCCTGTGGCCATCTCTTTCACAAAGATTGCTTGGAGAAGTGGCTGGCCTACTGGAACATTACATGCCCACTTTGCAGGACTCCGTTGTTGCCTGAAGAAGAGGTTTCTTCTTGCTTTTGGTGA 513 0.4678 MGLSSLPAPSEGVLCVLLVNTAFSISLVKGIVRTILHIVGISLSSSPTTPSPSPSPAPASSESSPSPDISHNLPDSFQVDLCSPENYIEEFRSRTPTIRFDTVCGCKQSVEHDCSVCLSQFEPESEINRLSCGHLFHKDCLEKWLAYWNITCPLCRTPLLPEEEVSSCFW 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02628 170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 160 IPR013083 -
Accr3g02628 170 ProSiteProfiles Zinc finger RING-type profile. 114 156 IPR001841 -
Accr3g02628 170 SUPERFAMILY RING/U-box 113 161 - -
Accr3g02628 170 SMART ring_2 114 155 IPR001841 -
Accr3g02628 170 MobiDBLite consensus disorder prediction 44 74 - -
Accr3g02628 170 PANTHER - 1 168 IPR044249 -
Accr3g02628 170 Pfam Ring finger domain 113 156 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02628 Accr-Chr3 54744702 54745214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02628 1 170 C3H Transcription Factor Family AT2G04240 59.538 4.64e-61 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02628 K16285 - cave:132183239 236.113