Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02627 ATGGGTTATATATGTGACTTTTGCGGAGATCAGAGGTCCATGGTGTACTGCCGTTCTGATGCTGCATGTTTATGTTTGTCATGTGATCGAAATGTTCATTCTGCTAATGCTCTTTCTAAGCGTCATCAAAGAACCCTTTTATGTGAGAGATGTAATTCACAACCCGCTACTGTACGGTGTTCCGAAGAGAAGATTACACTATGTCAGAACTGTGATTGGTTAGGTCATGCTCCTACTACATCTTCTTCAACACATAAGAGGCAAACGGTCAATTGCTACTCTGGCTGTCCTTCAGCAGAAGAATTTTCTTCGATATGGTCATTTGTCTTGGATATCGCGTCCATGGGTGAAACTAACTGCGAGCAGAAACTAGGTTTGATGACCATTGATGAGAACAGCAACAAAAGTGCTTGTGTTCCTACCGAAAGCCAGAATGTATCTGGTTCAGCTCGAGTAACTGATTTAGACAGCTTCAATAAGTCTTGTGCTGGGGCCCCTGAAATACCTGAGTCAAACTCAGAACCTCATATTCTGGACCCATCAACTGGACCTACCAATGAATGTTTGCCCAAGTTATACTGTCCTGGTACAAAAGGTCCAGCACGATATGAAAATGATGAAGATGATAGTCTGTATGGTGATTTTGACATGGATGAAATGGATCTGAATCTTGAGAACTATGAGGAACTTTTTGGAATGACTCTTACTCATTCTGAAGAACTCTTTGAAAATGGTGGAATTAATAGCTTGTTTGGGAAAAAGGATGTGTCTGCTGGTGGCGATTCTAATTGTCAGGGATCTGTTGCTGCTGAGGGTTCATCGGCTGGACTGGTCAATGCGGTGCAACCAGCATACAGCAATGCAGCCTCTGCAGATTCAAATGTGAGCACTAAAACTGAACCAATTCTTTGTTTTGCGGGGAAGCAAGCACAATCAAATCTTTCTTTTTCCGGGGTCACTGGAGATAGTGGTGCTGGAGATTATCAAGACTGTGATGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCTTGGTGTCCTCCTTGTCCTGAGAATTCAATACAATCTGCCAACCGCAGCAACGCTGTCATGCGTTATAAGGAAAAGAAGAAGACACGGATGTTTGACAAAAAAGTGAGGTATGCCTCTCGCAAGGCAAGAGCCGATGTCCGAAAGCGTGTGAAGGGCCGGTTTGTCAAAGCTGGGGAAGCTTATGATTATGACCCTTTGAGCCCAACCAGAAGCTATTGA 1248 0.4383 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSKRHQRTLLCERCNSQPATVRCSEEKITLCQNCDWLGHAPTTSSSTHKRQTVNCYSGCPSAEEFSSIWSFVLDIASMGETNCEQKLGLMTIDENSNKSACVPTESQNVSGSARVTDLDSFNKSCAGAPEIPESNSEPHILDPSTGPTNECLPKLYCPGTKGPARYENDEDDSLYGDFDMDEMDLNLENYEELFGMTLTHSEELFENGGINSLFGKKDVSAGGDSNCQGSVAAEGSSAGLVNAVQPAYSNAASADSNVSTKTEPILCFAGKQAQSNLSFSGVTGDSGAGDYQDCDASSMLLMGEPPWCPPCPENSIQSANRSNAVMRYKEKKKTRMFDKKVRYASRKARADVRKRVKGRFVKAGEAYDYDPLSPTRSY 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02627 415 MobiDBLite consensus disorder prediction 164 184 - -
Accr3g02627 415 Pfam CCT motif 358 400 IPR010402 GO:0005515
Accr3g02627 415 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Accr3g02627 415 ProSiteProfiles Zinc finger B-box type profile. 43 90 IPR000315 GO:0008270
Accr3g02627 415 SMART bboxneu5 4 47 IPR000315 GO:0008270
Accr3g02627 415 SMART bboxneu5 48 90 IPR000315 GO:0008270
Accr3g02627 415 ProSiteProfiles CCT domain profile. 358 400 IPR010402 GO:0005515
Accr3g02627 415 CDD Bbox1_BBX-like 4 47 - -
Accr3g02627 415 CDD Bbox1_BBX-like 47 87 - -
Accr3g02627 415 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02627 Accr-Chr3 54699509 54703520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02627 1 415 C2C2-CO-like Transcription Factor Family AT3G07650 55.374 1.15e-154 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Accr3g02627 CCT 1.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02627 - - gmx:100796748 662.529