Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02626 ATGGCTACGCCGCCGCAAGTCATAACATGCAAAGGTGCGGTGTGGTGGGGCGGCGGAGATAACGATGTGACGGTGGAAGACATTCAAGTGGATCCTCCCAAATCGACGGAAGTTCGTGTGAAGATGATCTGTGCCAGTGTCTGTCACACCGACCTCCTCAGGGCCAGAGGACTTCCACTCCCTTTGTTTCCCCGAGTGTTGGGCCATGAAGGAGTTGGTGTTGTTGAGAGCATTGGGGAGAGAGTAAAAGATGTGAAAGTAGGCGATGTTGTGATTCCAACAAACATTGGAGAATGCCAAGAGTGTGAGAACTGCAATTCAAAGGAATCGAACCTGTGCCTGAAATACCCTATTACTTTAAGTGGCTTAATGCTGGATAACACATCAAGGATGTCCATAAGAGGCCAAAAGATGTACCAACTTTTTAGTTGTTCCACATTTGCAGAGTACATGGTCATTGAAGAAAATTACGTCGTCAAAGTTGACCCCAACATTGACCCAGCCCATGCTAGCCTCATTTCCTGTGGGTTTTTAACTGGTTTTGGAGCTGCTTGGAAGGAAGCCAAGGTTCAACTTGGCTCATCCGTTGCTGTGTTTGGCCTTGGTGGTGTTGGGTTAGGGGCTATAAGTGCAGCCAAGATGATGGGGGCAACTAAGATAATTGGAGTCGACAAAAATGACATGAAGAAACCAAAAGGAGAAGCTTTTGGAATGACAGATTTTATCAATCCTGACAAAGCCTCTGATGATAAATCAGTTACAGAGTTGGTGAAGGAACTGAGTGATGGAATCGGTGTTGATTATTCTTTTGAATGCACTGGAGCTGCTCCTTTACTTACTCAAGCCCTTGAAGCCACCAAATTGGGAAAAGGAAAGACAATATCAGTAGGTGCAGTATCTCAAAAGTTTGTGAGCATCGACTTTCTCTCTCTTATACTTGGGAGATCTTTAAAAGGTTCCATTTTTGGAGGATTAAAACCCAAATCTGATCTGCCCTTCCTAGTTGACAAATGCTTGAAGAAAGAGTTTCCTCTGGACGAACTTCTCACTCATGAGGTTTCACTAGAAGAGATAGGCAAAGCATTGGAGCTATTGAAACAACCAGATTGTGTCAAAGTTGTCATTAAGATATCATTATGA 1140 0.4412 MATPPQVITCKGAVWWGGGDNDVTVEDIQVDPPKSTEVRVKMICASVCHTDLLRARGLPLPLFPRVLGHEGVGVVESIGERVKDVKVGDVVIPTNIGECQECENCNSKESNLCLKYPITLSGLMLDNTSRMSIRGQKMYQLFSCSTFAEYMVIEENYVVKVDPNIDPAHASLISCGFLTGFGAAWKEAKVQLGSSVAVFGLGGVGLGAISAAKMMGATKIIGVDKNDMKKPKGEAFGMTDFINPDKASDDKSVTELVKELSDGIGVDYSFECTGAAPLLTQALEATKLGKGKTISVGAVSQKFVSIDFLSLILGRSLKGSIFGGLKPKSDLPFLVDKCLKKEFPLDELLTHEVSLEEIGKALELLKQPDCVKVVIKISL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02626 379 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Accr3g02626 379 Gene3D - 180 320 - -
Accr3g02626 379 Pfam Zinc-binding dehydrogenase 203 327 IPR013149 -
Accr3g02626 379 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 320 - -
Accr3g02626 379 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Accr3g02626 379 SMART PKS_ER_names_mod 18 375 IPR020843 GO:0016491
Accr3g02626 379 PANTHER ALCOHOL DEHYDROGENASE 6 369 - -
Accr3g02626 379 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
Accr3g02626 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 340 IPR036291 -
Accr3g02626 379 SUPERFAMILY GroES-like 3 194 IPR011032 -
Accr3g02626 379 SUPERFAMILY GroES-like 328 375 IPR011032 -
Accr3g02626 379 Gene3D - 14 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02626 Accr-Chr3 54678852 54682768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02626 37 317 Monolignol Biosynthesis Gene Families AT4G37980 27.113 3.80e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02626 K00121 - qsa:O6P43_001731 515.768