Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02625 ATGGCTACGCCGCCGCAAGTCATAACATGCAAAGGTGCGGTGTGGTGGGGCGGCGGAGATAACGATGTGACGGTGGAAGACATTCAAGTGGATCCTCCCAAATCGACGGAAGTTCGTGTGAAGATGATCTGTGCCAGTGTCTGTCACACCGACCTCCTCAGGGCCAGAGGACTTCCACTCCCTTTGTTTCCCCGAGTGTTGGGCCATGAAGGAGTTGGTGTTGTTGAGAGCATTGGGGAGAGAGTAAAAGATGTGAAAGTAGGCGATGTTGTGATTCCAACAAACATTGGAGAATGCCAAGAGTGTGAGAACTGCAATTCAAAGGAATCGAACCTGTGCCTGAAATACCCTATTACTTTAAGTGGCTTAATGCTGGATAACACATCAAGGATGTCCATAAGAGGCCAAAAGATGTACCAACTTTTTAGTTGTTCCACATTTGCAGAGTACATGGTCATTGAAGAAAATTACGTCGTCAAAGTTGACCCCAACATTGACCCAGCCCATGCTAGCCTCATTTCCTGTGGGTTTTTAACTGGTTTTGGAGCTGCTTGGAAGGAAGCCAAGGCTATAAGTGCAGCCAAGATGATGGGGGCAACTAAGATAATTGGAGTCGACAAAAATGACATGAAGAAACCAAAAGGAGAAGCTTTTGGAATGACAGATTTTATCAATCCTGACAAAGCCTCTGATGATAAATCAGTTACAGAGTTGGTGAAGGAACTGAGTGATGGAATCGGTGTTGATTATTCTTTTGAATGCACTGGAGCTGCTCCTTTACTTACTCAAGCCCTTGAAGCCACCAAATTGGGAAAAGGAAAGACAATATCAGTAGGTGCAGTATCTCAAAAGTTTGTGAGCATCGACTTTCTCTCTCTTATACTTGGGAGATCTTTAAAAGGTTCCATTTTTGGAGGATTAAAACCCAAATCTGATCTGCCCTTCCTAGTTGACAAATGCTTGAAGAAAGAGTTTCCTCTGGACGAACTTCTCACTCATGAGGTTTCACTAGAAGAGATAGGCAAAGCATTGGAGCTATTGAAACAACCAGATTGTGTCAAAGTTGTCATTAAGATATCATTATGA 1086 0.4365 MATPPQVITCKGAVWWGGGDNDVTVEDIQVDPPKSTEVRVKMICASVCHTDLLRARGLPLPLFPRVLGHEGVGVVESIGERVKDVKVGDVVIPTNIGECQECENCNSKESNLCLKYPITLSGLMLDNTSRMSIRGQKMYQLFSCSTFAEYMVIEENYVVKVDPNIDPAHASLISCGFLTGFGAAWKEAKAISAAKMMGATKIIGVDKNDMKKPKGEAFGMTDFINPDKASDDKSVTELVKELSDGIGVDYSFECTGAAPLLTQALEATKLGKGKTISVGAVSQKFVSIDFLSLILGRSLKGSIFGGLKPKSDLPFLVDKCLKKEFPLDELLTHEVSLEEIGKALELLKQPDCVKVVIKISL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02625 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Accr3g02625 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 322 IPR036291 -
Accr3g02625 361 Gene3D - 303 354 - -
Accr3g02625 361 Gene3D - 14 179 - -
Accr3g02625 361 SMART PKS_ER_names_mod 18 357 IPR020843 GO:0016491
Accr3g02625 361 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
Accr3g02625 361 SUPERFAMILY GroES-like 310 357 IPR011032 -
Accr3g02625 361 PANTHER ALCOHOL DEHYDROGENASE 6 351 - -
Accr3g02625 361 Gene3D - 180 189 - -
Accr3g02625 361 Gene3D - 191 302 - -
Accr3g02625 361 SUPERFAMILY GroES-like 3 187 IPR011032 -
Accr3g02625 361 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Accr3g02625 361 FunFam S-(hydroxymethyl)glutathione dehydrogenase 178 302 - -
Accr3g02625 361 Pfam Zinc-binding dehydrogenase 190 309 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02625 Accr-Chr3 54678852 54682768 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02625 37 179 Monolignol Biosynthesis Gene Families AT4G37980 29.655 8.43e-15 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02625 K00121 - qsa:O6P43_001731 493.426