Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02624 ATGGCCCCAACGCCACAAGTTATTACATGCAAAGGTGCTGTATGGTGGGGAGGTGGAGAAAACGATGTGAGGGTGGAAGACATACAAGTAGATCCGCCCAAATCAAGCGAAGTTCGGGTCAAGTTGGTGTGTGCCAGTATCTGCCACACCGACCTCCTTTGGGCTTCAGGATTTCCCCTCCCTTTGTTTCCTCGGGTATTAGGGCACGAAGGGGTTGGTGTTGTTGAGAGCACTGGGGAGAAAGTAACAGATCTAAAAGTAGGCGATGTTGTGATCCCAACATATGTTGGAGAATGTCAAGAATGTGAGAATTGCACTTCAAGGGAATCCAACTTTTGCCTGAAATACCCCATGAGAATAAGCGGCTTAATGATGGATAACACATCAAGGTTGTCCGTAAGGGATCAAAAGATATTCCATCTCTTTAGTTGTTCCACATTTGCAGAGTACATGGTAACTGATGCGAATTACCTGGTAAAAGTTGATCCCAACATTGACCCAGCCCATGCTAGCTTGATTTCGTGTGGGTTCTCAACTGGTTTTGGAGCTGTTTGGAAGGAAGCCAGGGTTGGAAGTGGCTCATCCGTCGCGGTTTTTGGCCTTGGTGGTGTTGGTTTAGGGGCTATAAGCGCAGCCAAAATGATGGGGGTGAGTAAGATAATTGGGATTGACAAAAATGAGAAGAAGAAATCAAAAGGAGAAACTTTTGGAATGACACATTTTATCAATCCTGGGGCATCTGATAAATCAGCATCTAAATTGATCCAAGAACTAAGTGGTGGAATGGGTGTAGATTATTCCTTTGAGTGCACTGGAGTCGTCCCCTTGCTTTCTCAAGCCCTGCAAGCCACAAAAATGGGCAAGGGAAAGACAATAGCCGTTGGTGCAGTAACTGAAGAAAATGTGCCCATCCACTTTCGTTCCATTTCACTTGGGCGAACTTTAAAGGGTTCCCTTTTTGGAGGACTAAAACCCAAATCTGACCTGCCATTCATAGCTCACAAATGCCTGAAAAAGGAGTTTCCTCTTCATGAACTTGTAACTCATGAAGTGTCATTGACAGATATAGACAAAGCTTTGGAGCTATTAAAACAGCCAGACTGTGTCAAAGTTGTCATTAGGATTTAG 1128 0.4459 MAPTPQVITCKGAVWWGGGENDVRVEDIQVDPPKSSEVRVKLVCASICHTDLLWASGFPLPLFPRVLGHEGVGVVESTGEKVTDLKVGDVVIPTYVGECQECENCTSRESNFCLKYPMRISGLMMDNTSRLSVRDQKIFHLFSCSTFAEYMVTDANYLVKVDPNIDPAHASLISCGFSTGFGAVWKEARVGSGSSVAVFGLGGVGLGAISAAKMMGVSKIIGIDKNEKKKSKGETFGMTHFINPGASDKSASKLIQELSGGMGVDYSFECTGVVPLLSQALQATKMGKGKTIAVGAVTEENVPIHFRSISLGRTLKGSLFGGLKPKSDLPFIAHKCLKKEFPLHELVTHEVSLTDIDKALELLKQPDCVKVVIRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02624 375 Gene3D - 14 370 - -
Accr3g02624 375 Pfam Zinc-binding dehydrogenase 203 322 IPR013149 -
Accr3g02624 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Accr3g02624 375 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 318 - -
Accr3g02624 375 SUPERFAMILY GroES-like 5 189 IPR011032 -
Accr3g02624 375 PANTHER ALCOHOL DEHYDROGENASE 6 367 - -
Accr3g02624 375 SUPERFAMILY GroES-like 326 374 IPR011032 -
Accr3g02624 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 336 IPR036291 -
Accr3g02624 375 SMART PKS_ER_names_mod 19 373 IPR020843 GO:0016491
Accr3g02624 375 FunFam alcohol dehydrogenase 1-like isoform X1 19 179 - -
Accr3g02624 375 Pfam Alcohol dehydrogenase GroES-like domain 36 161 IPR013154 -
Accr3g02624 375 Gene3D - 180 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02624 Accr-Chr3 54672820 54676010 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02624 37 299 Monolignol Biosynthesis Gene Families AT4G37980 27.547 6.77e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02624 K00121 - qsa:O6P43_001731 504.982