Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02605 ATGAGAACTAAATCTCCTGGTGGAGGTAGGGCTAAAACTTCTACAAAACCTTCCCACCCTACCGCAAGGGCAATTCCTCGGGATGAAGATGATGCAGCTGTACCTAAAACATCCAATGAGAGTAATCGTGATCTGCTAGATGGTAGGGAGGTGGGTTCAAAAGACAACGTGGATAATGTAATTGATGAGGGCTCTAATAAAATCCTTTATGAGAGTTTAGGTCATGACAACATTTGTATAGATGTTGAGGATAGAAAAATTTGCATCCGTTGCAATGAAGGTGGAGAAATATTAGTTTGCGGTGAGAGTGGTTGTCCTGTTGTTGTCCATGCAAAATGTATCAGCTGCAAACCTAAATTTGATGATATGGGAAAGTACTACTGCCCTTATTGCTGGTTAAAACGAACATTGGCAGAGGTCCAAGTATTGAGGGATAAGGCTTTAACAGCGAAGAAAGATTTGGCAAACTTTTTAGGTAACAATGCAAATATGAGTAATAAATTAGCCCAAAAATATGGGGAAGAAAAAAGAAAAGATTCCAACGAGTTATCCCTTGCAGCAAATGGGAGCTGCATAGATTATAGGATTAGTAAGGGCAATGGCAGCACGTGCACACAGCCCTCACAGAGAGTGGAAGATCAACAAAATGACATGGAACAAGTGACAGCTAATGCTGATCAACACGATATAGCAATAGAAAATGACAATCATGCAAATGCTCAAGTAACCAGTACGGGTGATTCTATGCATCATGGGGGAGAAAACACACCAGAGCATATGGATCTGCTTGATAAATCTATGACCAGGGAGAAAGTTGATTTTCGTAAAATTTCCGAGGCACATAAAACCACGTTTGTTGAAGGAAAAGAGGAGATTGAACCAGAGCATCCAAGATGTAGTGATAAAAACGTTCAGGAAGGGATTCCTGAGGATGAAGAGGAAGCATCTCCTTCAAGCTCATGCCATATGGGAAAACACAAAGATGGACTCTCACCCAATTTTGCATTTGTCAAACGGACACAAGAAAGTATTGCAGAAGATAATAAGGACACAAGGCAAGACAGAGAGAAGTTGCTCCAGAATGAATCAAAATCAGTGGATACCTCTCTCAGTGAAACAAATGATTCAGGTTCTGAAGCTCTCTTAGTGAAAAAGCGACGTATCAAACATACAGCGCAGAAGCATCCTCGGAGAGTTAAGATCGCTGATGGTGAAAATGGTTGTCATGAAGATGAGGAAGTTACCAGTTCTGGAACTTTGAGACACACCCAGAAATCTTCCAAGCAAGGTCACTGCAAAAAACTGACTTTTCCAACTAGAAAACGGAGGAGATTACACTGGACAACTGAAGAAGAAAATAAACTAAAGGAAGGAGTTTTAAAATTCTCAAAGGAAAACCGAAATATTCCTTGGAGGAAAATTTTAGAATATGGTGGTGATGTATTTGATGAGACACGCACCCCAGCTGATCTTAAGGATAAATGGAGGACCATGGCAGCGGGGGCAGGATCATATCATCTACAGTACAAGTAG 1533 0.4083 MRTKSPGGGRAKTSTKPSHPTARAIPRDEDDAAVPKTSNESNRDLLDGREVGSKDNVDNVIDEGSNKILYESLGHDNICIDVEDRKICIRCNEGGEILVCGESGCPVVVHAKCISCKPKFDDMGKYYCPYCWLKRTLAEVQVLRDKALTAKKDLANFLGNNANMSNKLAQKYGEEKRKDSNELSLAANGSCIDYRISKGNGSTCTQPSQRVEDQQNDMEQVTANADQHDIAIENDNHANAQVTSTGDSMHHGGENTPEHMDLLDKSMTREKVDFRKISEAHKTTFVEGKEEIEPEHPRCSDKNVQEGIPEDEEEASPSSSCHMGKHKDGLSPNFAFVKRTQESIAEDNKDTRQDREKLLQNESKSVDTSLSETNDSGSEALLVKKRRIKHTAQKHPRRVKIADGENGCHEDEEVTSSGTLRHTQKSSKQGHCKKLTFPTRKRRRLHWTTEEENKLKEGVLKFSKENRNIPWRKILEYGGDVFDETRTPADLKDKWRTMAAGAGSYHLQYK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02605 510 MobiDBLite consensus disorder prediction 285 431 - -
Accr3g02605 510 MobiDBLite consensus disorder prediction 22 51 - -
Accr3g02605 510 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 176 IPR013083 -
Accr3g02605 510 Gene3D - 447 508 - -
Accr3g02605 510 SUPERFAMILY Homeodomain-like 446 499 IPR009057 -
Accr3g02605 510 MobiDBLite consensus disorder prediction 285 306 - -
Accr3g02605 510 MobiDBLite consensus disorder prediction 342 362 - -
Accr3g02605 510 SUPERFAMILY FYVE/PHD zinc finger 83 138 IPR011011 -
Accr3g02605 510 Coils Coil 211 231 - -
Accr3g02605 510 CDD SANT_TRF 447 498 - -
Accr3g02605 510 MobiDBLite consensus disorder prediction 1 51 - -
Accr3g02605 510 MobiDBLite consensus disorder prediction 397 418 - -
Accr3g02605 510 ProSiteProfiles Myb-like domain profile. 439 499 IPR001005 -
Accr3g02605 510 MobiDBLite consensus disorder prediction 363 378 - -
Accr3g02605 510 Pfam Myb-like DNA-binding domain 446 497 IPR001005 -
Accr3g02605 510 ProSitePatterns Zinc finger PHD-type signature. 88 131 IPR019786 -
Accr3g02605 510 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 24 501 - -
Accr3g02605 510 SMART sant 443 501 IPR001005 -
Accr3g02605 510 SMART PHD_3 87 132 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02605 Accr-Chr3 53975451 53979620 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr3g02605 Myb_DNA-binding 2.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02605 - - pcin:129302004 746.888