Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02604 ATGTTAAATCGAAGTGGTGGGAGGGACCGGTTTAGAAGGGATTACCCTTCAAGATTTGAAGATAAAGGCAACAATGGACGTAGCAATAGCAGCAACCCACCTTCCAGGCACCTTTGGGTTGGGAATCTAGCACACAGTATAACAGAGAATGAACTTGCTCGCCATTTTCTACAATTTGGACCTCTTGAAAGTGTAGCATTCCAACCTGCTCGTAGCTATGCTTTCATCAATTTCAGAAGGGATGAAGATGCTATTGATGCTTTGAAAGAACTTCAAGGTTATCCTGTTGCAGGCAACCCGCTTAGAGTTGAATTTGCTAAGGCGGATAAGCCACCGTCACTAACTCATGATGAAGATTACTCTTGGGATGAACGAAGCTCAGGGAGAAGAGCATCTCCTTTCACTCAAAGAGAGTTCAGAGGACGCCATGGTAGTCCTGAACCTCCTTATCCTGACAAATCCAAGCTGACTGATAAAAATCCAGAACCCAGTGAGGTTTTGTGGATAGGATTTCCATCTCAATTGAATGTGAATGATTTAGCTTTGAGAAGGGCTTTTTCTCCATTTGGTGAGATCGAGAAGATTACAACATTTCCAGGTCGTAGTTATGCTTTTGTTCGTTTTAGGAGTCTATCATCAGCACGCAGAGCTAGAGATGCTCTTCAAGGAAAGTTATTTGGAAATCCTCGTGTACATATTTGTTTTGCCAAGAGTGAAACTGGTTCATCAGGTGGTGGGAGGTTTTCGACTAACACCCCATCGTCCCCATTTTACACATCAAGCGGTCGTCATGGATCGATTGAGAACTTGAGACAAGATAGGGGTATTGCAGGCTTCGGTGGAGACCGTAGTGCTGGGTCCCCTAATATTTTCCCAAAATGGGACTTGGCAGATTCTGATCCTTATGATTCAGATGGAAGGGGTTCTTCACGGGCCAGGGGATTCAGTTCATATGAACAAAGGAGGGTTGGTGAAAGGGTGCCACCACTTGGAGTGCTACAAGACAGTTTTGAACACTCAATAAGTCCTTCTAGAGATAGACAAGCTCATCTAGGTACTTTTCCTCAGAGATACCCTAAAAAACATGCATTATTTGAAGATCCACGAGACTTTGCAGATGATGTGTATTATCAACATGACACTAAAAAACTGAAGACTGGATCTCTTCCTCCTGAAAAGGAGCTTCCGGAGTATCATCTTTCTGATTTAGAAGGGCAGAGGCGCCCGCTCCCACGGTTATTAACTGATTTACCCCAACATGAGGTCCTTGATAAAAGAATTGACGCTGGACCTGTTGTGCCTAGACAAACTTTTGATCGACCAAATTCCCCTTTTGGTAGGTCAGAGAGGAGCGAGCGCTGGAAGCCTAGTGATAGTTTCCATGTGGCTCCTAGTGCTCTGCAATCGTATTCTATTGAGAAGAGAAGACTCACACCTGAACCTAGTAGCTCATCTTTGACTGAGTGGAAATGGGAAGGAACCATTGCCAAAGGTGGAACACCTGTTTGTCGTGCGCGCTGCTTCCCTGTGGGAAAAGTCATGGATATCATGTTACCTGAATTATTGGATTGCACGGCGAGGACTGGCCTAGACATGCTTTCAAAGCATTATTACCAAGCGGCTGGTGCTTGGGTTGTTTTCTTCGTGCCTGAAAGCGATGTTGACATTGAATACTACAATGAATTCATGCATTACCTGGAGGAAAAGCGTAGGGCTGCAGTTGCCAAGTTAGACGACAGGAATACGTTGTTTCTTGTACCTCCATCAGATTTCTCAGAGAAAGTACTGAAGGTACCTGGAAAGTTGAGCATATCTGGTGTGGTTCTAAGGTTGGAGCATCCTGTTTCGGCTCAAGGGTCCATGCACAATCAATATGAAGTAAAAGATGGAAACTTGTCATATCTTGGTGATGCATTTTATCCAAATCCACCAAAGTCATCAGCTCGTAGTCCCCCGCCATTTACATCTGTTCCTGAAGGAATGAGCAATCTTTCTTACCTTGGAAGTAAGAATTCAGCGGCCATGCCTACTGCAGTTTCTGGTTCAGCTCATGCCATAGTTGGCACATCTGGTTCTTCTCATGATGGAAGAAGGGGACAGGATTATCATCCAGTTCAACAGCAGAACCACACATCAGGGCCGAATTGGTCTGCTAACAATCTTCAGACCTTGATATCCAATAGAAATTTGCCATCACAACTATCAAATAGTTCTGCTGAACCTCTTACTCAGGATCATCTACTAAGCCAAATTGGTCTGCCTGGAGGATCTCTGCAACAAGAGCAGCTTGCACAACTAGCGGCATCTCTTGTTGAGCAGCAGAGGCAATCAGGAAGCGCTCTGAGTGTATCTGCGCCGGATGATCCGAGGCAAACTCATAGAGCTAATGGGTCCGACACCACCTCTAGACCATCTCAAAAATACCCCGTTCAAAATAACTCAATGAATCCTGAACTTGCCACATCTCAGTATGGACAGCTTCTACAACTTCAAAAGCAACAGCAGATGTCAAACGTGCCATCTCAAGAATCACAGACAGTTCAAAGAGAGAGAATGGCCAACGGGAACGAGCAACCACTAACCGGTGGTAGTAACTTGCAGCAAGATGCAGAAGCAGATCCACAAAAGCGTCTGCAAGCGACATTACAGTTGGCTGCAGTTCTTCTCCAGCAAATTCAGCAAGGGAAAGGAAGTTAA 2697 0.4494 MLNRSGGRDRFRRDYPSRFEDKGNNGRSNSSNPPSRHLWVGNLAHSITENELARHFLQFGPLESVAFQPARSYAFINFRRDEDAIDALKELQGYPVAGNPLRVEFAKADKPPSLTHDEDYSWDERSSGRRASPFTQREFRGRHGSPEPPYPDKSKLTDKNPEPSEVLWIGFPSQLNVNDLALRRAFSPFGEIEKITTFPGRSYAFVRFRSLSSARRARDALQGKLFGNPRVHICFAKSETGSSGGGRFSTNTPSSPFYTSSGRHGSIENLRQDRGIAGFGGDRSAGSPNIFPKWDLADSDPYDSDGRGSSRARGFSSYEQRRVGERVPPLGVLQDSFEHSISPSRDRQAHLGTFPQRYPKKHALFEDPRDFADDVYYQHDTKKLKTGSLPPEKELPEYHLSDLEGQRRPLPRLLTDLPQHEVLDKRIDAGPVVPRQTFDRPNSPFGRSERSERWKPSDSFHVAPSALQSYSIEKRRLTPEPSSSSLTEWKWEGTIAKGGTPVCRARCFPVGKVMDIMLPELLDCTARTGLDMLSKHYYQAAGAWVVFFVPESDVDIEYYNEFMHYLEEKRRAAVAKLDDRNTLFLVPPSDFSEKVLKVPGKLSISGVVLRLEHPVSAQGSMHNQYEVKDGNLSYLGDAFYPNPPKSSARSPPPFTSVPEGMSNLSYLGSKNSAAMPTAVSGSAHAIVGTSGSSHDGRRGQDYHPVQQQNHTSGPNWSANNLQTLISNRNLPSQLSNSSAEPLTQDHLLSQIGLPGGSLQQEQLAQLAASLVEQQRQSGSALSVSAPDDPRQTHRANGSDTTSRPSQKYPVQNNSMNPELATSQYGQLLQLQKQQQMSNVPSQESQTVQRERMANGNEQPLTGGSNLQQDAEADPQKRLQATLQLAAVLLQQIQQGKGS 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02604 898 MobiDBLite consensus disorder prediction 702 719 - -
Accr3g02604 898 MobiDBLite consensus disorder prediction 240 265 - -
Accr3g02604 898 MobiDBLite consensus disorder prediction 777 817 - -
Accr3g02604 898 MobiDBLite consensus disorder prediction 22 36 - -
Accr3g02604 898 MobiDBLite consensus disorder prediction 107 161 - -
Accr3g02604 898 MobiDBLite consensus disorder prediction 830 876 - -
Accr3g02604 898 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 108 IPR000504 GO:0003723
Accr3g02604 898 FunFam RNA recognition motif (RRM)-containing protein 151 244 - -
Accr3g02604 898 CDD RRM_SF 38 104 - -
Accr3g02604 898 SUPERFAMILY RNA-binding domain, RBD 24 112 IPR035979 GO:0003676
Accr3g02604 898 Pfam SPOC domain 484 599 IPR012921 -
Accr3g02604 898 MobiDBLite consensus disorder prediction 830 874 - -
Accr3g02604 898 SUPERFAMILY RNA-binding domain, RBD 154 239 IPR035979 GO:0003676
Accr3g02604 898 MobiDBLite consensus disorder prediction 135 160 - -
Accr3g02604 898 CDD RRM_SF 167 233 - -
Accr3g02604 898 CDD SPOC_FPA-like 490 609 - -
Accr3g02604 898 Gene3D - 152 243 IPR012677 -
Accr3g02604 898 MobiDBLite consensus disorder prediction 1 21 - -
Accr3g02604 898 Gene3D - 18 113 IPR012677 -
Accr3g02604 898 MobiDBLite consensus disorder prediction 432 455 - -
Accr3g02604 898 MobiDBLite consensus disorder prediction 290 327 - -
Accr3g02604 898 SMART rrm1_1 37 104 IPR000504 GO:0003723
Accr3g02604 898 SMART rrm1_1 166 234 IPR000504 GO:0003723
Accr3g02604 898 MobiDBLite consensus disorder prediction 1 36 - -
Accr3g02604 898 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 165 238 IPR000504 GO:0003723
Accr3g02604 898 MobiDBLite consensus disorder prediction 242 265 - -
Accr3g02604 898 PANTHER RNA RECOGNITION MOTIF-CONTAINING 26 892 - -
Accr3g02604 898 MobiDBLite consensus disorder prediction 109 126 - -
Accr3g02604 898 MobiDBLite consensus disorder prediction 685 719 - -
Accr3g02604 898 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 176 230 IPR000504 GO:0003723
Accr3g02604 898 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 101 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02604 Accr-Chr3 53960187 53969369 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02604 37 237 Eukaryotic Initiation Factors Gene Family AT4G34110 22.897 1.22e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02604 - - gmx:100811668 983.015