Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02598 ATGGCTTCTTCCTCTTCCTTTCATTCTTCAAAGAAATACGATGTCTTCATCAGCTTCAGAGGCGAAGACACACGCGAAAGTTTCACCAGCCATCTTCACGCCGCTCTCTGTAGAAGCAAAATCGACACCTATGTCGATTACAGACTTGAGAAAGGAAGCGAGGTTTGGCCATCACTCGTCCAAGCCATTGATGATTCCATCCTGTTTCTGGTCGTTTTTTCTGAGAACTACGCTTCTTCCACTTGGTGCTTGAAGGAGATCACCAAAATTATACTCGATTGCTCTAAGGATCGAGAGAATCGTGTTCTTCCAGTTTTCTACAGGGTAAACCCTTCACATGTACGGAAACAAGAAGGTAGTTACAGAAAAGCATTTATAGATCATGAGAAAGGGAATCACAATGAGCAGGTGCCAGAATGGAGGAGTGCTCTCACTCAAGCTGCTAATTTATCTGGCTGGGATTCTAGTACCTTTAGGAATGAAGCTGCGCTGATTGCAGAAATTGTCACATGTATTCTAAAGAAGTTGGAGCGTATTCACCGAATTGTTTATTTTGATGGTCTTGTTGGAATTCATGAAAGAATTATGCCTTTAGAATTGTTCTTGAGCAAGCAGCCAAAAGATGTTAGATTTATTGGAATTTGGGGCATGGCTGGAATTGGCAAGACAACTATTGCAGCTTCAGTATTTAAGAAGCATTGCTGTGATTATGAAGGGTTTTGCTTCATGTCCAATGTAAGAGAAGAGTCAGAGAAGTTTGGCATCACTAATTTGAAGAATAAACTTCTTTCCAAATTATTAGATGACAAAGAATCTCTAGATGGCATGCCTGATAGAGGAACTCCTTTGGATATGAAAAGGCTTAGACGAACAAAGGTACTTGTTGTTCTTGATGACGTCAGTGACTCGGATCAACTCGAAATTTTAGCTGGAGCACATGATTGGTTTGGACCAGGCAGTAGAATTGTTATAACATCCAGAGATAAACAAGTGTTTGCTAAACAAGTGGATCATACGTATGTGGTTAAAGCTTTGGACTCTGGTGAAGCTCTTCAGCTTTTCAATTTGAATGCCTTCAAAAATAATGTCATTGACAAAGAGTTTGCCGTATTATCAGAGAAGGTGGTTGCCTATGCAAAAGGGACTCCATTAGCTCTGAAAATCTTGGGTTCATTTCTTTATGGCAAAAGTAAAAATGAGTGGGAAAGTCAATTAGAAAAACTCAAGAGAATGCCTGACATGAAAATTCAAAATGTGTTGAAATTGAGTTATGAAGGATTAGATTTTCAACAGCAAAATATTTTTTTGGATATTGCATGCTTTTTTAAGGGCAGAGATGTGGATGACATAAAAAATTTGTTAGATGCCTGTGATTATGCAACAACCATTGGATTAAAAGCTCTTGAAGACAAAGCTCTTCTAACTATTAAAGACGAGAAGGTATCTATGCATGATCTAATACAAGAAATGGCATGGGAGATAGTTCGAGGAGAATCAAAAGAAGAACCTGGAAAACGCAGCCGATTATGGGATTCTAATGATGTTTATGAAGTGTTGAAATATAACACGGGAACTGAGTCCATCAAAGGCATGGCTTTGGATATGTCAAAAATTGAGGATCTGCCCTTAAGTCCTGAAGTCTTCGCCAGAATGCGCAAGCTTAAGTTTCTTATATTTTATAATTTTGGTTCAGATGAGTTCAGATTGTATCTTCCTCAAGAGCTTAAATCTTTACCAAATGAACTCAGACTCCTTCAATGGGATAACTTCCCTTTGAAGTCCTTACCATCGACATTCTCCGCAGAGAAACTTGTTTCATTTGAAATGCGAAATAGCCAAGTCAGAATACTTTGGCATGGAAAGCAAAATCTAGTGAACTTGAGGAAACTTGACCTTACCGATTCCTATAATCTGATTGAGCTCCCAGATTTTTCAAAGGCCTTAAATCTTCAAGAGGTATATCTTGGCCACTGTACAAGCTTGCGTGACCTTCACCCATCTATTTTATCGCTCCATAAGCTTGAGATTCTACGTTTGGATTGGTGTGAGGCCCTTACTAGCCTTAGATGCGACATCCCTCTAAGATCCCTCCGTGACGTTTCCCTCTATGACTGCTCAAGATTGAAGGTATTTTCTGTCACCTCACAGAATATGAGGCATTTGAATCTAGCGGGGACTGCAGTGAGTGAATTGCCATTATCTATTACAAGTCAACGAAGACTTGAGAAGTTCTCTCTTATGGATGGTAGAAAACTTGATACTCAAAGCAAGTCAGGTGATCTGCTATCTGTGGGCAGGTCACATTCTGGAGACGATTATATTCACCTTGATGTATCAAATCTGCGTTTCTTAAACGATGGGTTAAGATCGTTGGAAGCCTTGCCTCATGGCACTAGCATGTTTTCTTCATTAGAAATCTTATTAATTGTTGGAACTGAGCTTAGAAACCTCCCTGCAGGCATCAAGCACCTTTTGAAGCTTCGATATCTTAGCTTCGATTCATGCAAAAGACTTCAGTCTCTGCCGGATCTTCCTTCATCATTACAACAATTAATAGCCGTTGACTGCCCTTCCCTTCAGACTCTTCACTTCTCTTCAACAACTAGTCAATTAGTGAAGGCGAACAAGATAAGCTTTGGCTTCCAAAACTGTGCGAAGTTGGATGAACATTCACTCGAACTAATTGGACCAGAAGTTATGGCTGAGGTAATCAAATCTGTTCCAGCCATAGGAAAATGCAATTTCTCAAACGGTAAGGTTGAAGTTTTATGCCATGGAAGCAGAGTTCCAGAGTGGTTTCTGCATAGGACAACACAAGCTTCCATTACTATTGATCTCTCTTCTGCTCTGCATTTTTCTGAGAATTGGGGTTTCATCTTTTGCGTCATTGTTCCTGAGTCCGCATCAATTGAATGGATTCGAGTTGAATGCGAAGCCTGCTTGGAAATTTGTTATGGTGAATGGGATTTGACCCACGAATACTATTCACTCTCTGCCAAGCATGACCACTTCACATCAGATCATGTTTTTATTTGCTATGATGAAAACTTTTGTTCTGAAATACGCGAGAAACTCACAGAAAGTGTGGCGGATGATCAGAGCAACACTCGTAAGCCGAAGGTTTCGTTTAATTTCTGGGTTCATTATGGTAGCGGGGATGTTAATAACAGGCAAGAGGGATGCTTGGATATCAAAGAGTGTGGGGTGTGCCCAACTTATGCATCCGAATATCGCGGATTCATTGAAAAACTGGACTCGCTATTAAAGTCAAAAACTGATGCAATTGAAATGGGACATGGAAGCTCTTCTAAGAACGAACAGAGACCTGAGGGATTTGTCTTTCCACCTCTTCCTCGTGGAACCTGGAAGCATGAAATAAAGGGGTTGGGAGACATCCTCTCCCTGTGA 3408 0.4038 MASSSSFHSSKKYDVFISFRGEDTRESFTSHLHAALCRSKIDTYVDYRLEKGSEVWPSLVQAIDDSILFLVVFSENYASSTWCLKEITKIILDCSKDRENRVLPVFYRVNPSHVRKQEGSYRKAFIDHEKGNHNEQVPEWRSALTQAANLSGWDSSTFRNEAALIAEIVTCILKKLERIHRIVYFDGLVGIHERIMPLELFLSKQPKDVRFIGIWGMAGIGKTTIAASVFKKHCCDYEGFCFMSNVREESEKFGITNLKNKLLSKLLDDKESLDGMPDRGTPLDMKRLRRTKVLVVLDDVSDSDQLEILAGAHDWFGPGSRIVITSRDKQVFAKQVDHTYVVKALDSGEALQLFNLNAFKNNVIDKEFAVLSEKVVAYAKGTPLALKILGSFLYGKSKNEWESQLEKLKRMPDMKIQNVLKLSYEGLDFQQQNIFLDIACFFKGRDVDDIKNLLDACDYATTIGLKALEDKALLTIKDEKVSMHDLIQEMAWEIVRGESKEEPGKRSRLWDSNDVYEVLKYNTGTESIKGMALDMSKIEDLPLSPEVFARMRKLKFLIFYNFGSDEFRLYLPQELKSLPNELRLLQWDNFPLKSLPSTFSAEKLVSFEMRNSQVRILWHGKQNLVNLRKLDLTDSYNLIELPDFSKALNLQEVYLGHCTSLRDLHPSILSLHKLEILRLDWCEALTSLRCDIPLRSLRDVSLYDCSRLKVFSVTSQNMRHLNLAGTAVSELPLSITSQRRLEKFSLMDGRKLDTQSKSGDLLSVGRSHSGDDYIHLDVSNLRFLNDGLRSLEALPHGTSMFSSLEILLIVGTELRNLPAGIKHLLKLRYLSFDSCKRLQSLPDLPSSLQQLIAVDCPSLQTLHFSSTTSQLVKANKISFGFQNCAKLDEHSLELIGPEVMAEVIKSVPAIGKCNFSNGKVEVLCHGSRVPEWFLHRTTQASITIDLSSALHFSENWGFIFCVIVPESASIEWIRVECEACLEICYGEWDLTHEYYSLSAKHDHFTSDHVFICYDENFCSEIREKLTESVADDQSNTRKPKVSFNFWVHYGSGDVNNRQEGCLDIKECGVCPTYASEYRGFIEKLDSLLKSKTDAIEMGHGSSSKNEQRPEGFVFPPLPRGTWKHEIKGLGDILSL 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02598 1135 SUPERFAMILY L domain-like 483 887 - -
Accr3g02598 1135 Gene3D - 191 342 IPR027417 -
Accr3g02598 1135 Pfam TIR domain 12 181 IPR000157 GO:0007165
Accr3g02598 1135 Pfam C-JID domain 924 1076 IPR045344 -
Accr3g02598 1135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 869 IPR044974 GO:0006952
Accr3g02598 1135 Gene3D Ribonuclease Inhibitor 522 717 IPR032675 -
Accr3g02598 1135 FunFam Disease resistance protein (TIR-NBS-LRR class) 346 428 - -
Accr3g02598 1135 SMART till_3 12 150 IPR000157 GO:0007165
Accr3g02598 1135 Pfam NB-ARC domain 202 414 IPR002182 GO:0043531
Accr3g02598 1135 ProSiteProfiles TIR domain profile. 11 176 IPR000157 GO:0007165
Accr3g02598 1135 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 178 - -
Accr3g02598 1135 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 153 IPR035897 -
Accr3g02598 1135 Gene3D - 9 182 IPR035897 -
Accr3g02598 1135 Gene3D - 344 428 IPR042197 -
Accr3g02598 1135 Gene3D Ribonuclease Inhibitor 718 923 IPR032675 -
Accr3g02598 1135 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 438 IPR027417 -
Accr3g02598 1135 PRINTS Disease resistance protein signature 287 301 - -
Accr3g02598 1135 PRINTS Disease resistance protein signature 622 638 - -
Accr3g02598 1135 PRINTS Disease resistance protein signature 211 226 - -
Accr3g02598 1135 PRINTS Disease resistance protein signature 379 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02598 Accr-Chr3 53820043 53823932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02598 7 837 WRKY Transcription Factor Family AT4G12020 33.333 1.23e-116 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02598 - - gmx:100799103 962.985