Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02573 ATGAAGCTCAATTTTGGATGTCCAGATCTTATGCTTTCTCTTCTCCTCCTTGGCTCCACTTCAATCTTCATCTTCCTCCCCCAGATCGCTCTCGCAGTCACACCCAAGCTCAGCATTAATGAAGTGAGGGCATTGATGGAGATAGGGAAGAAACTGGGGAAGAAGGAATGGGACTTTGGGGTAGATCCCTGCAGCGGTAAAGGCAAATGGAATGTGACAGATGAGAGGAAAGGCTTTGCCAGCTCTCTCATCTGTGATTGCTCCTTCAATCTCAATTCATCCTGCCATGTTGTAAGCATATTTTTGAAGGCTCAGAATCTTTCTGGTACTCTTCCACCAGAATTTTCCAAGCTTCGGCATCTCAAGCAATTGGACCTTAGTCGTAACATCTTCACTGGTTCTATACCTCAGCAATGGGCTACTATGCACTTGGATGAGCTCTCTCTTATGGGGAACAAGTTATCAGGTCCTTTTCCTAAAGTTCTCACCAATATCATAACCCTCAGAAACCTGAGCATTGAAGGGAACCTATTTTCAGGACCGATTCCTCCAGAGATTGGAAACTTGGTCAGGTTAAAAAAAATCATTCTGTCATCAAATGCATTCACAGGAGAATTGCCGTCGGCTCTTTCAAAGTTGACCAAGTTGACTGATTTGAGGATAAGTGACAATAATTTCTCTGGGAGGATGCCAGATTTCATTGGCAACTTGACATCAATTGAAAAGCTGCACATTCAGGGTTGCTCACTTGAGGGACCCATACCTTCCAGCATTTCTCGCTTAAGAAGATTATGTGATTTGAGGATAACTGACCTGAAAGGAAGAAGCTCATCTTTCCCCTCATTGGGTTATATGAAATCAATGAAGACCCTTATACTGAGGAGGTGCTTGATTAAAGGAAAGATCCCTGACTATATTGGGAATATGAACAAGCTGAAAATCTTAGACTTGAGTTTCAATGACTTGACTGGAAGGGTACCTGCCACTTTTGACCAACTCGACAAAGTAGACTTCATGTATCTTACTGGGAACAAGTTAGCAGGGACTATACCTATCTGGGTTCTTGGAAGAAATAGAAATGTTGATATTTCTGACAATAACTTTAGCTGGGAGAGCTCAAGTCCAGTTGAATGTCCAAGAGGGAGTGTAAATTTAGTGGAGGGCTACTCTTCTTCTGTCAATAAACAAAAAATTGTTCACGCATGCTTGAAAAAGAACTTTCCATGCTCTGATTTGGACAGACAATATTACTCCTTACACATTAACTGTGGTGGCAAGGAAGAAAATATCAGTGGTACTATTTATGAAGCGGACAGAGAACAAAGAGGTGCTTCAATGTTTTACTATGGCAAGAATTGGGCTCTCAGCAGCACTGGGAACTTCATGGACAATGATATTGAATCTGATCCCTATATTGTGACCAACACTTCCAAACTTCTCAATGTCTCTGCTCTCAGCTCAGAACTATACACGACAGCTCGTTTGTCTCCCCTTTCTCTCACATACTATGGACTCTGTCTAATGAATGGAAACTACACCGTTAGTCTCCACTTCGCAGAGATTTTGTTTATCAATGACAGATCATTTTACAGTCTTGGGAGGCGCGTGTTTGATGTCTACATACAGGGGAAGTTGGTCCTAAAGGACTTCAATATTGAGAAAGAAGCTGGTGGGACAGGAAAACCGATTGTGAAGACATATAACGCCACGGTCACGCAACATTCCTTGAAGATTCACTTTTATTATGCTGGAAAAGGGACTACTGGCATACCCACAAGAGGAATTTATGGACCTTTGATATCTGCCATATCAGTAGATCCTAATTTTAAACCTCCACCACCAGGGATTGGAAAGAGAACGTTTATTATAGTGGCAGTTGCTATGTCAGCTGCTCTTGTGCTTCTTGTTCTAATGCTGCTAGGAATCATGAGGTGGAAGGGCTGGTTAGGAGGCCAAGACTCTGTGTATAAAGAACTTAGAGGAATAGACCTGCAGACAGGATTATTCACATTAAGGCAAATCAAATCAGCAACTAAAAACTTTGATGCTACTAGCAAAATTGGAGAAGGCGGCTTTGGTCCTGTTTACAAGGGTCTACTATCTGATGGCACTGTAATTGCAGTAAAGCAACTCTCCTCAAAATCTAAGCAAGGAAACCGAGAGTTTGTGAATGAGATAGGAATGATTTCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGTGGAAGGGAACCAGTTGATACTGATATATGAGTATATGGAAAATAATTGTCTGTCACGAGCACTTTTTGGAAAAGATCCAATCTTTAAAGCAAAACTAGACTGGACAACCAGGAAAAAAATTTGCATGGGTATAGCTAGAGCTTTGGCTTATCTGCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACAAGTAATGTGTTGCTAGATAAAGATTTTAATGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTAATGAGGATGATATTACCCATATTAGCACTCGAGTTGCTGGAACCATTGGTTATATGGCTCCTGAGTATGCAATGCGTGGCTATTTGACTGATAAAGCTGATATATATAGCTTTGGGGTGGTTATGTTTGAAACTATCAGTGGAAAGAGCAATACAAATTACAGACCCAATGAAGAATTTGTTTACCTTCTTGATTGGGCCTATGTTCTGCAAGAGAGAGGGAATCTACTGGAACTTGTTGATCCAGACTTAGGATCCGAATATTCAGCCGAGGAGGCAATGGTCATGCTAAATGTAGCTCTCTTGTGTACCAATGCATCACCCACACTTAGGCCAAAAATGTCCCAAGTTGTGAGCATGCTTGAAGGCCAAACAGATATTCAGGATTTGCTTTCTGACCCAGGATACTCTGCAAGTAGTTCCAAACACAGGTCCATAAGAAGTCACTTCTGGCAGAATCCAGATTCTGATTCCTCTAGTTCATACCTTGGGACTGAAGGAAGCTACCGCCTTGTGCATGTTAACCCTGATATATCAGATAAGTAA 3042 0.4129 MKLNFGCPDLMLSLLLLGSTSIFIFLPQIALAVTPKLSINEVRALMEIGKKLGKKEWDFGVDPCSGKGKWNVTDERKGFASSLICDCSFNLNSSCHVVSIFLKAQNLSGTLPPEFSKLRHLKQLDLSRNIFTGSIPQQWATMHLDELSLMGNKLSGPFPKVLTNIITLRNLSIEGNLFSGPIPPEIGNLVRLKKIILSSNAFTGELPSALSKLTKLTDLRISDNNFSGRMPDFIGNLTSIEKLHIQGCSLEGPIPSSISRLRRLCDLRITDLKGRSSSFPSLGYMKSMKTLILRRCLIKGKIPDYIGNMNKLKILDLSFNDLTGRVPATFDQLDKVDFMYLTGNKLAGTIPIWVLGRNRNVDISDNNFSWESSSPVECPRGSVNLVEGYSSSVNKQKIVHACLKKNFPCSDLDRQYYSLHINCGGKEENISGTIYEADREQRGASMFYYGKNWALSSTGNFMDNDIESDPYIVTNTSKLLNVSALSSELYTTARLSPLSLTYYGLCLMNGNYTVSLHFAEILFINDRSFYSLGRRVFDVYIQGKLVLKDFNIEKEAGGTGKPIVKTYNATVTQHSLKIHFYYAGKGTTGIPTRGIYGPLISAISVDPNFKPPPPGIGKRTFIIVAVAMSAALVLLVLMLLGIMRWKGWLGGQDSVYKELRGIDLQTGLFTLRQIKSATKNFDATSKIGEGGFGPVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRALFGKDPIFKAKLDWTTRKKICMGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEDDITHISTRVAGTIGYMAPEYAMRGYLTDKADIYSFGVVMFETISGKSNTNYRPNEEFVYLLDWAYVLQERGNLLELVDPDLGSEYSAEEAMVMLNVALLCTNASPTLRPKMSQVVSMLEGQTDIQDLLSDPGYSASSSKHRSIRSHFWQNPDSDSSSSYLGTEGSYRLVHVNPDISDK 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02573 1013 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 651 756 - -
Accr3g02573 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 416 608 - -
Accr3g02573 1013 SMART serkin_6 681 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02573 1013 CDD STKc_IRAK 687 955 - -
Accr3g02573 1013 Gene3D Phosphorylase Kinase; domain 1 652 756 - -
Accr3g02573 1013 Gene3D - 419 607 - -
Accr3g02573 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase 757 965 - -
Accr3g02573 1013 SUPERFAMILY Protein kinase-like (PK-like) 665 983 IPR011009 -
Accr3g02573 1013 Gene3D Ribonuclease Inhibitor 41 209 IPR032675 -
Accr3g02573 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 43 206 - -
Accr3g02573 1013 Gene3D Transferase(Phosphotransferase) domain 1 757 965 - -
Accr3g02573 1013 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Accr3g02573 1013 Pfam Protein tyrosine and serine/threonine kinase 684 952 IPR001245 GO:0004672|GO:0006468
Accr3g02573 1013 SUPERFAMILY L domain-like 90 353 - -
Accr3g02573 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 991 - -
Accr3g02573 1013 Gene3D Ribonuclease Inhibitor 216 418 IPR032675 -
Accr3g02573 1013 Pfam Malectin domain 418 603 IPR021720 -
Accr3g02573 1013 ProSiteProfiles Protein kinase domain profile. 681 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02573 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 237 384 - -
Accr3g02573 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02573 Accr-Chr3 52969552 52982592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02573 40 996 Receptor kinase-like Gene Family AT1G53440 53.415 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr3g02573 PK_Tyr_Ser-Thr 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02573 - - gmx:100784864 1564.28