Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02544 ATGGAAGAATCACAGAATACAGAACAAACCCACATTCCCATACCCGCATTCCCCTCCAAACCAGAAATTATTGCCTCTGTCCCCCACCACATCCCCACAGCCGATGACTCTCTCCGGCCACCCCGCCACTGGCGTCGCCGCAGCAGAGACCAACCCACCACTACCACCACCACCAGGAAGAAGACAAAGACAATAAAGGAAGAAGATAGCTCTGATGACCACAAAGTAGCAGAAGAAGAAGAAGAAGATCGTGAGGAAGAAGAAGAAGATAGAGAAGAGATAGAGAAGAAGATAGAGGCATTACAGAGGATAGTTCCAGGTGGTGAATCCTTAGGAATGGACAAGCTCTTTGATGAAACTGCAGATTATATAATGACATTACAGTACCAAATCAAAGGCTTAAGAGCTCTCTCAAGCTTATTTGAGAGGTTAGAGAAAGACAAGTCCAAGCTTGGAGGTTGA 462 0.461 MEESQNTEQTHIPIPAFPSKPEIIASVPHHIPTADDSLRPPRHWRRRSRDQPTTTTTTRKKTKTIKEEDSSDDHKVAEEEEEDREEEEEDREEIEKKIEALQRIVPGGESLGMDKLFDETADYIMTLQYQIKGLRALSSLFERLEKDKSKLGG 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02544 153 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 141 IPR044660 GO:0006355
Accr3g02544 153 MobiDBLite consensus disorder prediction 74 92 - -
Accr3g02544 153 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 91 136 IPR036638 GO:0046983
Accr3g02544 153 Coils Coil 75 104 - -
Accr3g02544 153 MobiDBLite consensus disorder prediction 1 92 - -
Accr3g02544 153 CDD bHLH_AtIBH1_like 94 137 IPR044549 GO:0006355
Accr3g02544 153 MobiDBLite consensus disorder prediction 35 73 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02544 94 145 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G05800 34.615 1.04e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02544 - - pcin:129298466 182.956