Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02540 ATGTCATCCAATGGGTCTTTAAAAGCGGAATTGTCAAAGAAGGTTTTGGGTGTGAAATTATGGATTTTAATTGGGATTTGCGTAGGCGCGTTTATAGTATTGATTCTTTGTATATTATCTATATGGGTGATGTTTCGGAGAAAGTCTAGAAGATCTCTTGACGGGTATTCTTCATCCCAAATACCAAATATCTCAAAAGATATTAAGGTGGACAAAGTTGGGGTGCAGAGTTCTCATGATCATCCAGAAAGTGTATTTATTCATGTTAATGACAAATCAACTGATAAGAATTCAGATAAGATGCTTGCCCACTTAGGTATGAGCAAGTCCAGTGATCCTGATAATATCAGTCAATGCAGTTCAATGTATCATCATGAGAGAGGATTTAGTTCCCTGTCAGGAGAAGAAGGAAGCTCTGGGACTGTAAAGAAGCATTCCACATTGTCATATGGAGGGCTTGTGACTGCATCTCCTTTAGTTGGCTTGCCAGAAATTTCTCATCTTGGATGGGGTCATTGGTTTACACTTAGGGATCTGGAACTGGCAACAAATCGTTTCTCAGCTGAAAATGTGTTAGGTGAGGGCGGATATGGTATTGTTTACAAGGGCAGGCTGATCAATGGAACTGAGGTGGCAGTGAAGAAAATTCTTAATAACTTGGGACAGGCAGAGAAAGAATTCGGGGTAGAAGTGGAAGCTATAGGCCATGTACGACATAAAAATCTTGTACGCCTGCTTGGATACTGCATTGAAGGAGTTCACAGGCTTTTGGTGTATGAATATGTAAATAACGGCAACTTAGAACAATGGTTACATGGGGCTTTGCGCCAACATGGAATTCTTACCTGGGAGGCCCGCATGAAAGTTGTAATTGGCACTGCCAAAGCGCTTGCTTACTTGCATGAAGCAATTGAACCAAAAGTTGTTCACCGTGATATAAAGTCAAGCAACATATTAATTGATGATGAGTTTAATGCAAAGGTTTCTGACTTTGGATTGGCCAAACTTTTGGATTCAGGAGAAAGCCACATAACTACTAGAGTAATGGGAACATTTGGTTATGTGGCACCAGAGTATGCTAATACTGGTTTATTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCCTCTTGGAAGCAGTCACTGGAAGGGACCCTGTAGACTATGCGCGACCAGCTAATGAGGTTAATCTTGTTGAATGGCTCAAGATGATGGTGGGGACAAAAAGAGCTGATGAAGTTGTAGATCCAAGCCTTGAAGTTAAACCACCAACACGAGCTTTAAAGCGTTCTCTTCTGGTCGCACTTAGGTGTGTTGATCCTGATGCAGACAAGAGACCCAAAATGAGTCAGGTTGTGAGGATGCTTGAAGCTGATGAATATCCCTTCCGAGAGGATCGAAGGAACCGGAAGAGCCGCACTACTAGCATGGAAATTGATTCCATCAAGGATATTTCTGGTTCATCTGAAGCAGAAAAGAAGCCAGGCGAGGCTGAAAACCTAGCACCAGATACAGCTGAGGGGTAG 1530 0.4209 MSSNGSLKAELSKKVLGVKLWILIGICVGAFIVLILCILSIWVMFRRKSRRSLDGYSSSQIPNISKDIKVDKVGVQSSHDHPESVFIHVNDKSTDKNSDKMLAHLGMSKSSDPDNISQCSSMYHHERGFSSLSGEEGSSGTVKKHSTLSYGGLVTASPLVGLPEISHLGWGHWFTLRDLELATNRFSAENVLGEGGYGIVYKGRLINGTEVAVKKILNNLGQAEKEFGVEVEAIGHVRHKNLVRLLGYCIEGVHRLLVYEYVNNGNLEQWLHGALRQHGILTWEARMKVVIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKMMVGTKRADEVVDPSLEVKPPTRALKRSLLVALRCVDPDADKRPKMSQVVRMLEADEYPFREDRRNRKSRTTSMEIDSIKDISGSSEAEKKPGEAENLAPDTAEG 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02540 509 FunFam Putative receptor-like protein kinase 168 261 - -
Accr3g02540 509 MobiDBLite consensus disorder prediction 464 509 - -
Accr3g02540 509 MobiDBLite consensus disorder prediction 464 479 - -
Accr3g02540 509 FunFam Putative receptor-like serine/threonine-protein kinase 262 472 - -
Accr3g02540 509 SMART serkin_6 186 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02540 509 Pfam Protein kinase domain 188 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02540 509 SUPERFAMILY Protein kinase-like (PK-like) 170 460 IPR011009 -
Accr3g02540 509 Gene3D Phosphorylase Kinase; domain 1 168 261 - -
Accr3g02540 509 Gene3D Transferase(Phosphotransferase) domain 1 262 475 - -
Accr3g02540 509 PANTHER OS01G0323000 PROTEIN 1 480 - -
Accr3g02540 509 ProSitePatterns Protein kinases ATP-binding region signature. 192 215 IPR017441 GO:0005524
Accr3g02540 509 MobiDBLite consensus disorder prediction 486 501 - -
Accr3g02540 509 Coils Coil 206 226 - -
Accr3g02540 509 ProSiteProfiles Protein kinase domain profile. 186 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02540 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Accr3g02540 509 CDD STKc_IRAK 192 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02540 Accr-Chr3 52263826 52267478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02540 17 460 Trihelix Transcription Factor Family AT1G70460 40.444 5.01e-98 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Accr3g02540 Pkinase 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02540 - - tcc:18612176 877.856