Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02522 ATGAAGGAGAGACAACGTTGGACATCTGAAGAGGATGCTTTATTACGTGCTTATGTCAAACAGTATGGTCCTAGGGAATGGAATCTTGTGTCCCAACGCATGAACAAACCTCTTAACAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTGAAGCCTGGCATCAAGAAGGGGTCTCTCACCGAAGAAGAGAAATCTCTTGTCATCCATCTTCAACAGATTTACGGCAACAAATGGAAGAAAATTGCTGCAGAAGTCCCAGGTCGTACTGCCAAGAGATTAGGTAAGTGGTGGGAAGTATTTAAAGAGAAGCAGCAGAGAGAAAAAAAGGATATCAACAAAACAGTTGACCCAATTGATGACACCAAATACGGTCATATACTTGAGACTTTTGCGGAAAAGCTTGTGAAAGAACGACCTTCCCCATCCTACCTCATGGCTGCCTCCAGTGGGGCCTTTATTCTCACTGATGCACCGGCTCCTCCATCAGCTATGCTTCCTTCTTTACTTTCAAATTCTGACAGCACTTCAGCTATTAGGCCGCCTTCTCCTTCTGTGACGCTTAGTCTCTCTCCCTCAACTGTTGCTGCTTCTCCTCCATTTCGATGGTTTCAACCTGAGAAAATGACAGAGAATGCTTCTCCTGTTATTGGGAATGTAAAACCTCATGGAACTATTTCAGGTTTTGGTGATAACATGCTTGTATCTGAACTGGTTGGATGCTGTAAAGAATTGGAAGAAGGGCACCGGTTGTGGTCATTGCATAGGAAGGAAGCAGCATGGAGGTTAAGGCGGGTGGAGTTGCAGTTGGAGTCAGAGAAGGCATGTCGTATCCGGGAGAAGATGGAAGAGTTTGAAGCTAAGATTAAAGCTCTTTGGGAAGAAAAGATGGCTGCTTTGGATAGAATGGAAGCTGAATACCGGGAGCGGCTAGCTGAACTGAGAAGAGATGCGGAAACCAAGGAGCAGAAATTGGCTGCAAAGCACTCAAGGCTAAGTAAGTTTCTGGAACAAATAGGTTGCAGGCCCAAGCTTGCTGAGTCAAATGTAAGATGA 1062 0.452 MKERQRWTSEEDALLRAYVKQYGPREWNLVSQRMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEKSLVIHLQQIYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKDINKTVDPIDDTKYGHILETFAEKLVKERPSPSYLMAASSGAFILTDAPAPPSAMLPSLLSNSDSTSAIRPPSPSVTLSLSPSTVAASPPFRWFQPEKMTENASPVIGNVKPHGTISGFGDNMLVSELVGCCKELEEGHRLWSLHRKEAAWRLRRVELQLESEKACRIREKMEEFEAKIKALWEEKMAALDRMEAEYRERLAELRRDAETKEQKLAAKHSRLSKFLEQIGCRPKLAESNVR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02522 353 Gene3D - 62 119 - -
Accr3g02522 353 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Accr3g02522 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Accr3g02522 353 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Accr3g02522 353 Gene3D - 4 58 - -
Accr3g02522 353 FunFam MYB-related transcription factor 4 58 - -
Accr3g02522 353 CDD SANT 6 53 IPR001005 -
Accr3g02522 353 Coils Coil 299 333 - -
Accr3g02522 353 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Accr3g02522 353 SMART sant 58 106 IPR001005 -
Accr3g02522 353 SMART sant 3 55 IPR001005 -
Accr3g02522 353 Pfam Myb-like DNA-binding domain 7 69 - -
Accr3g02522 353 CDD SANT 63 104 IPR001005 -
Accr3g02522 353 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 349 - -
Accr3g02522 353 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02522 Accr-Chr3 51638279 51639340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02522 1 344 MYB Transcription Factor Family AT2G37630 62.740 4.01e-148 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g02522 Myb_DNA-bind_6 1.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02522 K09422 - qsa:O6P43_016767 512.301