Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02482 ATGAGGCTTTTTTCTTCAGGACTTGGTCAACCGGCTCAAGAAGGGGAGAAAAAATGTTTAAATTCTGAACTATGGCATGCATGTGCTGGTCCTCTGGTGTCTCTGCCACCTTTTGGAAGTCGTGTGGTCTACTTTCCCCAAGGTCATAGTGAGCAGGTTGCTGCTTCAACTAACAAGGAAGTAAATGCACATATTCCCAATTACCCTAACTTGCCACCACAGCTCATCTGTCAGCTTCACAATGTGACAATGCATGCAGATGTGGAAACAGATGAAGTATATGCTCAAATGACTCTGCAACCTTTAAGTCCGCAAGAGCAAAAGGATATGTATCTACTGGCTGCAGAATTGGGTACTGCCAGCAAACAACCAACCAACTACTTCTGCAAAACATTAACAGCAAGTGATACAAGCACTCACGGAGGATTTTCTGTCCCTCGTAGAGCTGCCGAAAAAGTCTTCCCTCCTCTTGATTACTCGCAGCAGCCTCCTGCACAGGAGCTAATTGCAAGGGATCTTCATGATAATGAATGGAAATTCAGACATGTTTTTCGAGGTCAGCCAAAGAGGCATCTTCTAACTACAGGGTGGAGTGTTTTTGTTAGTGCTAAGAGGCTTGTTGCTGGTGATTCAGTCCTTTTTATCTGGAATGACAAAAATCAGTTCCTCTTGGGAATCCGGCGAGCAAATCGTCCACAGACTGTCATGCCGTCTTCAGTTTTGTCAAGTGACAGCATGCATATTGGCCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAATAGCCGCTTTACTATATTCTATAACCCAAGGGCAAGCCCATCAGAATTTGTCATTCCCTTGGCTAAGTATGTCAAAGCTGTATATCATACCCGAGTTTCTGTTGGCATGCGATTTAGGATGTTATTTGAGACAGAAGAATCAAGTGTCCGTAGGTACATGGGCACTATAACAGGCATTAGTGATTTAGATCCTGTTCGCTGGCCAAATTCACACTGGCTTTCAGTGAAGGTTGGCTGGGATGAGTCCACTGCAGGGGACAGGCAGCCCAGAGTTTCCTTGTGGGAGATTGAACCGTTGACAACATTCCCTATGTATCCATCCCCGTTCCCATTGAGGCTGAAACGCCCTTGGCCATCAGGACTACCTTCTTTTGGTCTAAAAAATGGTGACATGAGCATTGGTTCTCCATTCACGTGGCTCCAAGGTGGGCTTGGGGATCCAGGAATGCAATCTCTGAACTTCCAGGGACTGGGGGTTGCACCATGGATGCAGCCAAGACTTGATGCTTCTATGTCCGGACTTCAGCCAGAAATATACCAAGCAATGGCTGCTGCTGCACTTCAGGAAATGAGGGCAATGGGTCCGTCTAAGCCTTCTTCTGAATCTTTGCTGCAGTTTCAGCAGTCTTCAAATATTCCTGGTGCTCCTTCTTCTTGTATCCAGAGGCAAGTGTTACAGCAGACTCAGTCCCAAAATGTCCTACAAAACTTGCAAGAAAACCAGATTCCTTCTCAGTCTTTGCTTCTGCAACGACAGTTGCAGCGCTACCATCCTTATAATGATCAGAGGCGGCAGCGGCAGCAGCAGCAACCTAACAGTTTACCTGTTCAGCAGCAGATCTCTAACGTTTTCTCTCCTTTGTCTAATTTCACATCATCTACCCAGTTTCTCTCTCCTTCCATGCCAGCCATTCCTTCAAATTGCCAGCAGCAGAATTTTCCGGAACCTTCCAGGAATCAAATGCCTGGCTCTGATGTTTCTGCTATCCAGAGTCTACTAGGATCATTTCCCCAGGATGGAGTATCCCAGTTACTTAACATGAATGGATCCAACTCTCTGGTTTCTCCTACTTCTTTACTACCCAAGCAAGTAACTGTTGAACCTCAGCTTCAAACTGCTGCTGCTCAGTGTGTATTACCCCAGCAGGAAAGCTTGGGAATGTCACACTCAAATGTATCTGAACTTCCTACTTTGCCTCCGTTTCCTGGAAGAGAATATTCTGCATACCAAGCTTCCAACTTTGCTGGTGCTACAGGGACTGATTATCCTCCAAGTTCAGACATGACAACATCAAGTTGTGTAGATGAATCTGGCTTTTTGCAGTCTTCTGAAAATGTGGAGCAAGCAAATACATCAACTGGAACCTTTGTCAAGGTTCACAAGTCAGGGTGCTTTGGGAGGTCACTGGACATCTCTAAGTTTAGCAGCTACGATGAACTACGTAATGAGCTTGCTCGCATGTTTGGGCTTGAAGGCCAACTACAGAACCCTCAGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGATGACCCTTGGCAGGAGTTTGTAAACAATGTGTGGTACATCAAGATTCTCTCTCCTCTTGAAGTACAACAAATGGGCAGAGAAAGTCTTGGTCCCACAGCTTCTGCATTGGGTCACAAGCTTTCTACCACTGGCAATGCTTGTGATAACTACATGAGTCAACTAAGAGATGAGAAATCCTGGTAA 2520 0.4587 MRLFSSGLGQPAQEGEKKCLNSELWHACAGPLVSLPPFGSRVVYFPQGHSEQVAASTNKEVNAHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDMYLLAAELGTASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHVFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQFLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWLSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPSFGLKNGDMSIGSPFTWLQGGLGDPGMQSLNFQGLGVAPWMQPRLDASMSGLQPEIYQAMAAAALQEMRAMGPSKPSSESLLQFQQSSNIPGAPSSCIQRQVLQQTQSQNVLQNLQENQIPSQSLLLQRQLQRYHPYNDQRRQRQQQQPNSLPVQQQISNVFSPLSNFTSSTQFLSPSMPAIPSNCQQQNFPEPSRNQMPGSDVSAIQSLLGSFPQDGVSQLLNMNGSNSLVSPTSLLPKQVTVEPQLQTAAAQCVLPQQESLGMSHSNVSELPTLPPFPGREYSAYQASNFAGATGTDYPPSSDMTTSSCVDESGFLQSSENVEQANTSTGTFVKVHKSGCFGRSLDISKFSSYDELRNELARMFGLEGQLQNPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGRESLGPTASALGHKLSTTGNACDNYMSQLRDEKSW 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02482 839 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Accr3g02482 839 FunFam Auxin response factor 292 364 - -
Accr3g02482 839 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
Accr3g02482 839 SMART B3_2 128 230 IPR003340 GO:0003677
Accr3g02482 839 FunFam Auxin response factor 126 230 - -
Accr3g02482 839 Gene3D - 292 364 - -
Accr3g02482 839 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 16 804 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr3g02482 839 MobiDBLite consensus disorder prediction 452 471 - -
Accr3g02482 839 FunFam Auxin response factor 710 804 - -
Accr3g02482 839 CDD B3_DNA 127 228 IPR003340 GO:0003677
Accr3g02482 839 Gene3D - 126 229 IPR015300 -
Accr3g02482 839 SUPERFAMILY CAD & PB1 domains 706 789 - -
Accr3g02482 839 ProSiteProfiles PB1 domain profile. 715 799 IPR000270 GO:0005515
Accr3g02482 839 SUPERFAMILY DNA-binding pseudobarrel domain 115 257 IPR015300 -
Accr3g02482 839 Pfam AUX/IAA family 704 797 IPR033389 -
Accr3g02482 839 Pfam Auxin response factor 254 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr3g02482 839 Gene3D - 711 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02482 Accr-Chr3 50928366 50937539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02482 97 809 B3 DNA Binding Superfamily AT5G37020 54.939 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr3g02482 AUX_IAA 4.4e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02482 - - pcin:129302482 1396.72