Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02457 ATGACAGTCATGGAAGAATCAGGCGAATTGCAATCAGAAGAGAATAAAGTTTCTATCGAGAAAAATAAGAAAAGGAGGCTTAAAACACCAGCCCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTAGCTGGATGGTTTTGCCACAGAAGGTTAAAAGATAAAAGATTGCTGAAAGATGAAACATGTGCTAATGGACGACAAGATCGATCAAGTGGCATCGTCCAGGACCATGTAAGTGGACTAAGGCAAGATTCGTGTGGAAGCACTAAACATGGTGATAATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCTACTATGGCAATGACTTTTCTGTTGCAGATATGACGTATGAACATAATAGAGACTATAATGAAGATGTTGATGGAATGGATAACACATCTTCTGAGAGTAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATATGGAGCCTTCTAGATATCTGACACCTAACAGAGCTCTGCCACCTTTGGTTCCCAAAGCTGCAATTAACATTGGATATAAACCATCAGGATATTTGAAAGTGAAGGGTGAGATAGAAAATGCTACTATAACTGCTGTCAAGAAGCAATTAGGAAGGAACTATCGGGAAGATGGTCCCCTACTTGGTGTGGAATTTGATCCAGTTCCTCCAGGGGCTTTTGAGTGCCAAATTGCAGCAGACCCAGTTGATGAATCATTGGTATTCCATGCTGTGAATCCTTCTCTTCCCAGTCCTCCAGAAATTTCTGCCGTGAAAAGGCAACCCGCCCTTAACTCTAGGTATGACTCCAAATATGGTTCCCATGATTTAGATATGGAAGTGGGAGATCTTGGCTCCTTGCATGACACTGACTTACTGGATAGAAAACCTGGCCGGCACAAGCAAGGGCAGACGTTTCAGAGTTATACCAATCATTTACCTCATAGGAACTCGCCCCTGGAGTTGTATGAAGGTCCCACTGGAGCAGTGCCTGCCTATAATACAATGGGCTCTAAGCATGGTGAAGGGATGAGATCTGATTCTGCTTCTTACCAGAGTGATCACTTTGAAGAGGACCTTGTGGTTAAGGAGACAGATTCACTTCCGCATTGCTATGATAATGTCAATCCAAAGAAAATTCAGAGGAGTGAGCATATAAAATCTAAGCCTTCAAAGTCATTAAAAAATTCTCGCGTTTTTCTTGATTCTGAAGAAACAGGACTATCTTCAAGGATAGCAAAGGAAGAGAAGTTTGGTGGGGGCAAGAAGGCAAGAAAACAATACCATGATTCAGAGAGAGTAAGGATTCTTCCAAATGAAACCATGATTGCAAAAAGAGTTAAAGATGATCTTCCTCAACAACAAAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACAGAGATGCTTTCTAGCTTTAGTGAGGATGAAACCGCTGAAACCAGTTATTCGCTGGACTAA 1560 0.416 MTVMEESGELQSEENKVSIEKNKKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVAGWFCHRRLKDKRLLKDETCANGRQDRSSGIVQDHVSGLRQDSCGSTKHGDNKHLDLKEVESHGYYGNDFSVADMTYEHNRDYNEDVDGMDNTSSESSSSLQDQLFSQGQDPYNMEPSRYLTPNRALPPLVPKAAINIGYKPSGYLKVKGEIENATITAVKKQLGRNYREDGPLLGVEFDPVPPGAFECQIAADPVDESLVFHAVNPSLPSPPEISAVKRQPALNSRYDSKYGSHDLDMEVGDLGSLHDTDLLDRKPGRHKQGQTFQSYTNHLPHRNSPLELYEGPTGAVPAYNTMGSKHGEGMRSDSASYQSDHFEEDLVVKETDSLPHCYDNVNPKKIQRSEHIKSKPSKSLKNSRVFLDSEETGLSSRIAKEEKFGGGKKARKQYHDSERVRILPNETMIAKRVKDDLPQQQNLKHALVAEMQPQKNRRSATEMLSSFSEDETAETSYSLD 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02457 519 MobiDBLite consensus disorder prediction 89 110 - -
Accr3g02457 519 MobiDBLite consensus disorder prediction 9 23 - -
Accr3g02457 519 MobiDBLite consensus disorder prediction 488 519 - -
Accr3g02457 519 CDD homeodomain 23 78 IPR001356 GO:0003677
Accr3g02457 519 SMART HOX_1 21 83 IPR001356 GO:0003677
Accr3g02457 519 MobiDBLite consensus disorder prediction 86 117 - -
Accr3g02457 519 MobiDBLite consensus disorder prediction 155 175 - -
Accr3g02457 519 ProSiteProfiles 'Homeobox' domain profile. 19 79 IPR001356 GO:0003677
Accr3g02457 519 SUPERFAMILY Homeodomain-like 21 87 IPR009057 -
Accr3g02457 519 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 4 519 - -
Accr3g02457 519 MobiDBLite consensus disorder prediction 147 175 - -
Accr3g02457 519 Gene3D - 11 95 - -
Accr3g02457 519 Pfam Homeodomain 23 78 IPR001356 GO:0003677
Accr3g02457 519 MobiDBLite consensus disorder prediction 1 23 - -
Accr3g02457 519 MobiDBLite consensus disorder prediction 493 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02457 Accr-Chr3 50501797 50510391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02457 6 519 Homeobox Transcription Factor Family AT4G03250 39.852 1.94e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Accr3g02457 Homeodomain 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02457 - - gmx:100803515 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g02457 3 50501797 50510391 Accr3g02457 3 50501797 50510391 ECH