Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02447 ATGGCTAATCATATTCATGGCTTTGGAGTCTCCTTTCTCCAACATCCTCAACCATCAAATAATGACTCCTTTGAACAATATATTAACCCCCAAAGCTTGGCCGCACTGTCCAAAGGAACTGAACTTCTTGTTGGTGGTCACTTTGCTGCACCCCCATTGTTTGTACCACCACCTTGGCCTGGCCAATTTAACATCCCCGGTGGCGGCTACAGTGGCGGTGGAAAAAGTAGCTGCAGAGGAAGTGGCAATAACACTGCAAATATGCGCACAAAACTGAAACAAACAATAAGGAAACCAAAAGGAAGGCCACCTGGGTCCAAGAATAAGCCAAAACCTGAAATAATGGATGAACAAGCTCTCAAACATGCAATCATTGAGATCCCTGCTGGGTGTGACGTGGTGGAGGAGCTGATCAAGTTTGCAGAAATTCACAATGTCGGCCTTACTGTTCTTAGTGGTTCTGGTTCTGTAACTAACGTCACTCTTAGCCACACACTTTCCAATAATGCTCCTTCTTTGACCCTAAATGGAACCTTCGTTATGCTCTCTCTTTCTGGTACTTATGTGAAGACCCAAAATTGTTCTTCGTCGTCATTACCACCAAACCCATCTTCATTTCCTGGTGTTGTGTCTTCCCCTGGATTTTCTTGTTTCACTATGTGTCTTGCAGGAACTAAAGGTGAAATCTTTGGAGGAGTCATAGCTGGAAAAATCATAGCTGCGAGTCTTGTGGTTGTGGTGGCTGCATTGTACAAGAAACCTATGTTTCACAGAGTCCTAAAAAATAATAAACTAATAATAACAGTGTTCTAG 813 0.433 MANHIHGFGVSFLQHPQPSNNDSFEQYINPQSLAALSKGTELLVGGHFAAPPLFVPPPWPGQFNIPGGGYSGGGKSSCRGSGNNTANMRTKLKQTIRKPKGRPPGSKNKPKPEIMDEQALKHAIIEIPAGCDVVEELIKFAEIHNVGLTVLSGSGSVTNVTLSHTLSNNAPSLTLNGTFVMLSLSGTYVKTQNCSSSSLPPNPSSFPGVVSSPGFSCFTMCLAGTKGEIFGGVIAGKIIAASLVVVVAALYKKPMFHRVLKNNKLIITVF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02447 270 CDD DUF296 124 239 IPR005175 -
Accr3g02447 270 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 87 259 IPR014476 GO:0003680
Accr3g02447 270 ProSiteProfiles PPC domain profile profile. 117 270 IPR005175 -
Accr3g02447 270 Gene3D - 120 267 - -
Accr3g02447 270 SUPERFAMILY AF0104/ALDC/Ptd012-like 116 262 - -
Accr3g02447 270 Pfam Plants and Prokaryotes Conserved (PCC) domain 123 249 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02447 Accr-Chr3 50282241 50283053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02447 94 259 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.351 2.69e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02447 - - pcin:129302785 219.55