Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02446 ATGGCAGCTTCATGCTTGAACCCACCAAGGTTATCTAGCGCTGAAGATGACCATGTGATACTCTTTTCAACCACTAATTCTCCTCAAGACTCAATCTCCATCAGCCCTTATTCTTCTTCATATCATTCTTCTCCTTCTTCTTCTTCTTCTTCTTCTGGTAATCATAAACTTTCTGTTACCAATCTCTCCTACACTCTTCACCCACATAAATCCATACCCTTTTCATTCTTTCACATGCCTCAAAAGCCTAGGCCTCTCCATATACTCAAGTCAGTCTCTTTTACTGCCAAAAGTTCTGAGATTGTTGCTGTTGTTGGTCCTAGTGGAACCGGGAAATCCACGCTTCTTCGTGTCATTGCGGGGCGCGTTGAAGACAGAGACTTTGATCCCGGAACCATATCAATCAATGATCATCCAATGACTAGTCCATCTCAGTTGAGGAAGATCTGTGGGTTTGTGGCACAAGAGGATAATTTGCTTCCTCTTTTGACTGTGAAAGAAACCTTAATGTTCAGTGCCAAGTTTAGGCTAAAAGAAATGTCATCAAAGGATAGAGAAGTGACAGTAGAGAGTTTGTTGCAAGAGCTTGGGCTGCTTCATGTTGCAGATAGCTATGTTGGAGATGAAGAGAATAGAGGGATTTCTGGTGGAGAGAGGAAAAGGGTATCTATAGGTTCTGATATGATTCATAATCCTCCTATTTTGGTCTTAGATGAGCCAACCTCAGGTCTAGACAGTTCTTCAGCTCTTCAAGTTATAGAGCAGCTTTCATTTATGGTTAAGTCAAGGAAAAGGATAGTGATTCTTTCAATTCACCAACCCAGCTATAGAATATTGCAGTACATTTCGAGGTTCTTGATCCTGTCCCATGGTTCAGTTGTGCACAATGGTAGCTTGAGGTCACTTGAGAAAACCATTACCAGGTTGGGATTTCAGATTCCAACGCAGCTCAATGCTCTAGAGTTTGCAATGGAAATTATACACACATTAGATTCAAAAAATTCCACATATGATAGTGACATCACTTGTCCCATAATGCAAGACAAGGAAGAAGAAACTGGTGACATTCATAATTATACAAGTGATAATAACAGCAAAAGGATTTGCAGTGCCTGGTATTTGAACTTCATTGAGATATTGTTTCTCTGCTCAAGATTTTGGAAGGTCATTTACAGAACAAAGCAGCTTTTCCTGGCCAGAACAATGCAGGCTCTAGTTGGTGGGTTTGGACTTGGAAGTGTTTACATAAAGGTGAGGAAGGATGAAGGAGGGGTAGCAGAAAGACTTGGCCTTTTTGCATTTAGTTTGAGTTTCCTGCTCTCTTCCACAGTTGAGGCACTTCCAATATACCTTCAAGAGAGAAGTGTTCTAATGAAAGAAGCCTCAAGAGGAGCCTACAGAATTTCCTCATACATGGTGGCAAACACACTTGTCTTCCTTCCCTTCTTGTTTGTAGTATCCATACTTTTCTCGGTTCCGGTGTACTGGATCGTAGGTCTCAACCCGTCCCTCTCGGCTTTCGCCTTCTTCATCTTCATCGTGTGGCTCATAGTGCTCATGGCAAGCTCTCTGGTTATGTTCTTAAGTGCACTGTCTCCTGATTTCATTTCTGGGAACTCCATGATCTGTACTGTATTAGGAGCATTCTTCTTGTTCTCTGGGTACTTCATTCCAAAAGAGAGCATCCCCAAGTACTGGATTTTCATGTACTATGTGTCACTTTATAAGTACCCTCTTGATGCATTGCTCACAAATGAGTATTGGAATGTTAGGACTGAGTGTTTCTCTTCATCAAAAACAGAATCTAATTGCTTGCTTACTGGTTTTGATGTGCTCAAAAGTAGAGGACTTGATAAAGATACGAGGTGGATGAATGTGAGCATCATGCTTGGCTTCTTTCTGCTATATCGTGTGCTTTGTTGGCTTATTCTCACTAGAAAGGCTTCCAAGGCGACCATATAG 1962 0.4149 MAASCLNPPRLSSAEDDHVILFSTTNSPQDSISISPYSSSYHSSPSSSSSSSGNHKLSVTNLSYTLHPHKSIPFSFFHMPQKPRPLHILKSVSFTAKSSEIVAVVGPSGTGKSTLLRVIAGRVEDRDFDPGTISINDHPMTSPSQLRKICGFVAQEDNLLPLLTVKETLMFSAKFRLKEMSSKDREVTVESLLQELGLLHVADSYVGDEENRGISGGERKRVSIGSDMIHNPPILVLDEPTSGLDSSSALQVIEQLSFMVKSRKRIVILSIHQPSYRILQYISRFLILSHGSVVHNGSLRSLEKTITRLGFQIPTQLNALEFAMEIIHTLDSKNSTYDSDITCPIMQDKEEETGDIHNYTSDNNSKRICSAWYLNFIEILFLCSRFWKVIYRTKQLFLARTMQALVGGFGLGSVYIKVRKDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERSVLMKEASRGAYRISSYMVANTLVFLPFLFVVSILFSVPVYWIVGLNPSLSAFAFFIFIVWLIVLMASSLVMFLSALSPDFISGNSMICTVLGAFFLFSGYFIPKESIPKYWIFMYYVSLYKYPLDALLTNEYWNVRTECFSSSKTESNCLLTGFDVLKSRGLDKDTRWMNVSIMLGFFLLYRVLCWLILTRKASKATI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02446 653 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 57 315 IPR003439 GO:0005524
Accr3g02446 653 Pfam ABC-2 type transporter 379 587 IPR013525 GO:0016020|GO:0140359
Accr3g02446 653 Gene3D - 59 339 IPR027417 -
Accr3g02446 653 MobiDBLite consensus disorder prediction 33 54 - -
Accr3g02446 653 FunFam ABC transporter G family member 23 80 313 - -
Accr3g02446 653 Pfam ABC-2 type transporter 272 338 IPR043926 GO:0140359
Accr3g02446 653 Pfam ABC transporter 89 242 IPR003439 GO:0005524
Accr3g02446 653 SMART AAA_5 98 300 IPR003593 GO:0016887
Accr3g02446 653 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 40 638 - -
Accr3g02446 653 ProSitePatterns ABC transporters family signature. 214 228 IPR017871 GO:0005524|GO:0016887
Accr3g02446 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 307 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02446 Accr-Chr3 50270591 50273078 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02446 42 346 Calmodulin-binding Proteins AT2G36910 28.025 3.40e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02446 K05681 - gmx:100783883 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr3g02446 3 50270591 50273078 Accr3g02446 3 50270591 50273078 ECH