Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02438 ATGGGCAATTGTTGCACCAACAACAACGAGGGAGGAGAAGCAACCACTGACAATCAACAAAACAATATCATCAACAACACAGGACGAGGAACACCCACCTCTTCAAAGCCTCCTCCGACACCATCCCCTCCTTGGACAAAAAAGATCGGCACAGTCCTTGGCCGGCCCATGGAGGATGTGAAGGCCACGTACAGCATAGGAAAGGAGCTAGGACGAGGACAATTCGGTGTCACACATTTATGTACACATAAACAAACAGGTGAACAATTTGCATGCAAGACCATAGCCAAGAGGAAGCTTGTGCACAAAGAAGATATGGAAGATGTACGTAGGGAGGTTCAAATCATGCACCATATGGCTGGTCAACCAAATATTGTGGAGCTCAAAGGTGCTTATGAGGACAAGCAATCGGTCCATCTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAGAGGTCATTACACAGAGAAAGGTGCCGCGTCGTTGTTGAGGAACATAGTTGAGATTGTTCATACTTGTCATTCCATGGGGGTCATACATAGAGATCTTAAGGCTGAGAATTTCCTGTTGCTTAATAACGAGGGAAATTCTCCTCTCAAAGCCACCGATTTTGGTCTCTCCGTTTTTTACAAGCAAGGAGAGATATTTAAAGACATAGTTGGGAGTGCATATTACATTGCACCAGAGGTATTGAGGAGGAAATACGGCCCAGAAGCTGATATTTGGAGTGTTGGCGTAATGCTTTACATTCTTCTCTGTGGTGTTCCTCCATTTTGGGCAGAATCAGATAATGGAATATTCAATGCCATATTAAGAGGGCATGTTGACTTTACAACGGATCCATGGCCAAGCATATCTCCTTCAGCAAAAGATCTCATCAGAAAAATGTTAAATACAGATCCCAAGCAAAGGCTCACAGCTTATCAAGTCTTGAATCATCCATGGATAAAAGAGGATGGAGAAGCACCAGATACACCTCTTGATAATGCTGTGCTGAATAGGCTCAAGCAATTCAGAGCCATGAATCAATTCAAGAAAGTTGCTCTCAAGGTAATTGCTGGGTGCTTATCAGAGGAAGAAATAATGGGATTGAAGGAGATGTTCAAGGGGATGGACACTGACAATAGTGGAACCATAACAATTGAAGAGCTCAAGCAAGGCCTTGCAAAGCAAGGCACCAAACTCAGTGAGCAAGAAGTCAAGCAATTATTAGATGCTGCAGATGCTGATGGGAATGGAACTATAGATTATGACGAGTTCATCACAGCAACATTGCATTTGAATCGAATCAACAAAGAAGAACATCTTTATACTGCTTTCCAATACTTCGATAAAGACAATAGCGGGTTCATTACGATGGAAGAACTAGAGCAGGCACTCCGGGAATATAACATGCATGATGGTAGGGACATCAACGAAATATTATCAGAAGTCGATTCAGATAATGATGGTCGAATAAACTACGAGGAGTTCTCAGCAATGATGAGGAAAGGAGCTCCGGAAGCCCAAACCAGAAAGAGACGTACAGAGTCATTTAGCAAATGA 1563 0.4383 MGNCCTNNNEGGEATTDNQQNNIINNTGRGTPTSSKPPPTPSPPWTKKIGTVLGRPMEDVKATYSIGKELGRGQFGVTHLCTHKQTGEQFACKTIAKRKLVHKEDMEDVRREVQIMHHMAGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIIARGHYTEKGAASLLRNIVEIVHTCHSMGVIHRDLKAENFLLLNNEGNSPLKATDFGLSVFYKQGEIFKDIVGSAYYIAPEVLRRKYGPEADIWSVGVMLYILLCGVPPFWAESDNGIFNAILRGHVDFTTDPWPSISPSAKDLIRKMLNTDPKQRLTAYQVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNQFKKVALKVIAGCLSEEEIMGLKEMFKGMDTDNSGTITIEELKQGLAKQGTKLSEQEVKQLLDAADADGNGTIDYDEFITATLHLNRINKEEHLYTAFQYFDKDNSGFITMEELEQALREYNMHDGRDINEILSEVDSDNDGRINYEEFSAMMRKGAPEAQTRKRRTESFSK 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02438 520 ProSiteProfiles EF-hand calcium-binding domain profile. 476 507 IPR002048 GO:0005509
Accr3g02438 520 FunFam Calcium-dependent protein kinase 1 66 149 - -
Accr3g02438 520 SUPERFAMILY Protein kinase-like (PK-like) 38 348 IPR011009 -
Accr3g02438 520 MobiDBLite consensus disorder prediction 1 33 - -
Accr3g02438 520 FunFam Calcium-dependent protein kinase 1 330 505 - -
Accr3g02438 520 ProSitePatterns EF-hand calcium-binding domain. 378 390 IPR018247 -
Accr3g02438 520 Gene3D Transferase(Phosphotransferase) domain 1 150 329 - -
Accr3g02438 520 SMART serkin_6 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02438 520 Gene3D - 330 505 - -
Accr3g02438 520 Pfam EF-hand domain pair 439 502 IPR002048 GO:0005509
Accr3g02438 520 Pfam EF-hand domain pair 370 430 IPR002048 GO:0005509
Accr3g02438 520 Gene3D Phosphorylase Kinase; domain 1 66 149 - -
Accr3g02438 520 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Accr3g02438 520 MobiDBLite consensus disorder prediction 1 46 - -
Accr3g02438 520 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Accr3g02438 520 ProSitePatterns Protein kinases ATP-binding region signature. 70 97 IPR017441 GO:0005524
Accr3g02438 520 SMART efh_1 369 397 IPR002048 GO:0005509
Accr3g02438 520 SMART efh_1 405 433 IPR002048 GO:0005509
Accr3g02438 520 SMART efh_1 476 504 IPR002048 GO:0005509
Accr3g02438 520 SMART efh_1 441 469 IPR002048 GO:0005509
Accr3g02438 520 SUPERFAMILY EF-hand 362 502 IPR011992 -
Accr3g02438 520 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Accr3g02438 520 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Accr3g02438 520 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Accr3g02438 520 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Accr3g02438 520 CDD STKc_CAMK 64 321 - -
Accr3g02438 520 PANTHER SERINE/THREONINE-PROTEIN KINASE 59 497 - -
Accr3g02438 520 Pfam Protein kinase domain 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02438 520 ProSiteProfiles Protein kinase domain profile. 64 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr3g02438 520 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Accr3g02438 520 FunFam calcium-dependent protein kinase 1 150 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02438 Accr-Chr3 50131398 50136605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02438 1 518 EF-hand Containing Proteins AT5G12180 78.409 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Accr3g02438 Pkinase 6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02438 K13412 - qsa:O6P43_020973 854.358