Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02410 ATGGCCACTGAAGCTTGTGAAAATAAGCCGAAGAATGTAGCAGATCAAGGACGGAATCGACGAGTTCTTCAAGATATTGGGAATCTTGTGGATATTTCTAAGCGAATCACTAATCAAGAAGCAGAGAAGATCAAGAAACCAAGCTTTGAAACAACGAAAGTATTAGCGGCAGGGAAGATTGTCCAGCCAGAAGGACCTGAAGTTATTATAATTAGCTCTGATGAAGAAGATAGTGAGCAAGTAAAGGAGACGAAGAAGAAGAAAGAACCTGCCAAGGGACTAAACTCAAAACAACACTCAACTAAGAAGAACGTGAAGACTCTCAGTGCAATCCTCTCTGCTCGAAGCAGGGCTGCTTGTGGACGTACTTACAAGCCAAAGGATCACGTGCATGATGTTGATGCAGCTGATGTTGACAATGAATTGGCAGCTGTGGAGTACATTGACGAACTCTACAAGTACTACAAGTTTGCAGAAAGTGAAAGCCGTGTGTACGATTACATGGGATCACAACCTGATGTGAATGCCAAGATGAGAGCAATTCTTGTGGACTGGTTGATAGAAGTGCATCGCAAATTTGAACTGATGCCTGAAACCCTTCATCTGACTGTAAACATAGTGGACCGTTTCCTTTCCTTAAAGGTTGTGTCCAGAAAGGAGCTTCAGCTTGTTGGAATCAGTTCCATGCTCATAGCCTGCAAATATGAGGAGATTTGGGCTCCAGAGGTGAATGACTTTGTGTGCATATCAGACAATTCTTACAAAAGAGAACAGGTTCTAGTGATGGAGAAAACAATCCTAAGGAAGCTGGAATGGTATTTAACTGTTCCTACACCATACGTCTTCCTTGTCCGCTATATCAAAGCATCTTCTCCTCCTGATAAAGAGATGGAGAATATGGTGTATTTCCTAGCTGAACTTAGCCTAGTTCACTATGCCACTGTAATATTGTATGGCCCCTCTGTTATTGCTGCTTCTGCTGTGTATGCAGCTCGTGTAACCCTTGGAAGGAGCCCATTCTGGACGCAGACTCTAGAACATTACACAGGCTTCTCTGAGGACCAATTAAGGGAATGTGCTAAACTCATGGTGAGCTTTCATTCCCTGGCTGGTGAAAGCAAGTTGAAAGCTGTTTTCAAGAAATTCTGTAATCCAGAACGTTGTTCTGTTGCTCTTCTTCCTCCAGCAAAATGTTTGCTGATAGAGAATGCCAGATGA 1218 0.4294 MATEACENKPKNVADQGRNRRVLQDIGNLVDISKRITNQEAEKIKKPSFETTKVLAAGKIVQPEGPEVIIISSDEEDSEQVKETKKKKEPAKGLNSKQHSTKKNVKTLSAILSARSRAACGRTYKPKDHVHDVDAADVDNELAAVEYIDELYKYYKFAESESRVYDYMGSQPDVNAKMRAILVDWLIEVHRKFELMPETLHLTVNIVDRFLSLKVVSRKELQLVGISSMLIACKYEEIWAPEVNDFVCISDNSYKREQVLVMEKTILRKLEWYLTVPTPYVFLVRYIKASSPPDKEMENMVYFLAELSLVHYATVILYGPSVIAASAVYAARVTLGRSPFWTQTLEHYTGFSEDQLRECAKLMVSFHSLAGESKLKAVFKKFCNPERCSVALLPPAKCLLIENAR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02410 405 CDD CYCLIN_AtCycB-like_rpt1 127 272 - -
Accr3g02410 405 PIRSF Cyclin_A_B_D_E 1 405 IPR046965 GO:0016538|GO:0044772
Accr3g02410 405 Pfam Cyclin, N-terminal domain 152 274 IPR006671 -
Accr3g02410 405 SUPERFAMILY Cyclin-like 139 274 IPR036915 -
Accr3g02410 405 SMART cyclin_7 281 365 IPR013763 -
Accr3g02410 405 SMART cyclin_7 184 268 IPR013763 -
Accr3g02410 405 Pfam Cyclin, C-terminal domain 277 395 IPR004367 -
Accr3g02410 405 MobiDBLite consensus disorder prediction 70 101 - -
Accr3g02410 405 Gene3D - 164 275 - -
Accr3g02410 405 MobiDBLite consensus disorder prediction 75 96 - -
Accr3g02410 405 Gene3D - 151 391 - -
Accr3g02410 405 SUPERFAMILY Cyclin-like 278 399 IPR036915 -
Accr3g02410 405 PANTHER CYCLINS 96 376 IPR039361 -
Accr3g02410 405 ProSitePatterns Cyclins signature. 179 210 IPR006671 -
Accr3g02410 405 FunFam G2/mitotic-specific cyclin-1 265 391 - -
Accr3g02410 405 SMART Cyclin_C_2 277 396 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02410 Accr-Chr3 49049931 49052150 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02410 5 394 Core Cell Cycle Gene Families AT2G26760 55.102 2.25e-148 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02410 K21777 - qsa:O6P43_014681 506.523