Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr3g02404 | ATGGCTGCAAGTTTTGCATCTAAGTGTTCTCGTGTGGGCCATTCTCTGTTTGGTGGGCTAGGCAATAGTTTATCTGGTTTAGTTACCACATCACAAGAGATCATATGCAACAAATTCTTGTCTCAGCAGCAGCAGCAGCAGCAGCGCAGCTTCATCCAGATGAGGACTGTTCTCAAGGTTGTGGATAATTCAGGGGCTAAGAAGGTTATGTGCATCCAACCTCTGAAAGGGAGGAAAGGGGCAAGATTAGGTGACACCATAATTGCTTCAGTAAAGGAAGCCCATCCTAATGGAAAAGTTAAGAAAGGGAAAGTTGTGTATGGCGTGGTCGTGCGTGCTGCAATGCAAAGGGGGCGATGTGATGGCAGTGAGGTCAAGTTTGATGATAATGCTGTGGTGCTTGTTGACAAGCAAGGGCAGCCGATTGGGACGAGGGTTTTTGGACCTGTCCCACATGAGCTGAGGATGAAGAAACATGTCAAGATTCTTACATTAGCAGGGCACATTGCTTAA | 513 | 0.4678 | MAASFASKCSRVGHSLFGGLGNSLSGLVTTSQEIICNKFLSQQQQQQQRSFIQMRTVLKVVDNSGAKKVMCIQPLKGRKGARLGDTIIASVKEAHPNGKVKKGKVVYGVVVRAAMQRGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRMKKHVKILTLAGHIA | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr3g02404 | 170 | PANTHER | 50S/60S RIBOSOMAL PROTEIN L14/L23 | 52 | 169 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Accr3g02404 | 170 | SMART | Ribosomal_L14_2 | 51 | 170 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Accr3g02404 | 170 | Pfam | Ribosomal protein L14p/L23e | 52 | 169 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Accr3g02404 | 170 | NCBIfam | 50S ribosomal protein L14 | 52 | 169 | IPR005745 | GO:0003735|GO:0006412|GO:0015934 | |
Accr3g02404 | 170 | Hamap | 50S ribosomal protein L14 [rplN]. | 51 | 170 | IPR000218 | GO:0003735|GO:0005840|GO:0006412 | |
Accr3g02404 | 170 | Gene3D | Ribosomal protein L14 | 51 | 170 | IPR036853 | GO:0003735|GO:0005840|GO:0006412 | |
Accr3g02404 | 170 | FunFam | 50S ribosomal protein HLP, mitochondrial-like | 51 | 170 | - | - | |
Accr3g02404 | 170 | SUPERFAMILY | Ribosomal protein L14 | 52 | 169 | IPR036853 | GO:0003735|GO:0005840|GO:0006412 | |
Accr3g02404 | 170 | ProSitePatterns | Ribosomal protein L14 signature. | 108 | 134 | IPR019972 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr3g02404 | Accr-Chr3 | 48977446 | 49008240 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr3g02404 | 62 | 153 | Cytoplasmic Ribosomal Protein Gene Family | AT3G04400 | 36.364 | 4.62e-09 | 50.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr3g02404 | K02874 | - | zju:107410789 | 262.307 |