Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02370 ATGGAAAATAGCGTCCAGGGAGAATCTTCTTCCAGCTCTGATACTTTCAATTCAACTACTAAATGGAAATATGATGTGTTCCTGAGTTTTACAGGAAAAGACACTCGTTTGAAGTTTGTGGATCATTTAGATGAAGCCTTTAATAGAAGTGGGATCAAAACTTTCAGGGATGATGTAGATCTTGAGAGAGGGGGAGACATAAAGCAAGAGCTCTTTCAAGCAATTCAGGATTCTCTCTGCGCAGTTCCTATTATCTCTGAAAATTATGCGAATTCGACATGGTGTTTGGATGAGCTTCAAAAGATTTTTGAATATGGTCGGCGGGTTTTTCCCATCTTCTATGATGTTGATCCAGCTGATGTTAGACACCAACGAAACCGTTTCCGGGAAGCCTTGGCTGAACATGAAGAGAAATTCAATAAAAATACAAAGAAAGTGCAGAATTGGAAAAACGTTTTGTTTGAAATTGGCAACTTGTCTGGTTGGGACACCAGGGGCAGGCATGAAGCAGAACTTATAAAAGATATAGTAGCAAAGGTATCGACTTATTTACATTCTAAATTACCATCTTATGATGACAATCTGGTTGGAATTGAATCAAGAGTGCATGATATGGAGACAATCTTGGAGATTGGGTTGGATGATAAACGTGGTGTAGGGATATGGGGTATGGGCGGTGTTGGTAAAACAACTCTTGCTAGAGTTGTTTACAAAAAAATATCTTACGAGTTTGAAGTTTGTTGCTTTATTGCAAACGTTAGGGACACTTTGCAAAAAGAAGGCCTAGTCTGTTTGCAAGAAAAGCTTCTTTCTGACCTCAAAATAGAAAACATGAAAATTTCTAATCAATATGAAGGAAAGGAGATGATAAGAAAGCATCTATCAAGTAAAAAGGTTCTTCTTGTCCTTGACGATGTAGATGATATGAGTCAATTAGAAAATTTAGCTAAAAGTTCAGATTGGTTTGGTAAAGGAAGCAGAATACTTATCACAACAAGAGATAGCCATGTGCTCACCTTAGCTGAAGTAGGGCAAAGAATATATGAGATGAAAGCCATGGAGAAAGATGAATCTATTCGACTCTTTTCAAATGAAGCATTCAAAAAAGATCATCCTGTAGAGGGTTATTGGGAGTTATCTAGATATGTGGTTGAGTATGCAGGAGGTCTTCCTTTGGCACTTAAAGTTTTGGGTTGTTATTTTTACATGAGAAGTAAAGCTGAGTGGATAGATGCTTTAAATAGAATGAAGCAAGTTCATCCTCACAAAAGTATTCTTCAAGTACTTAAAATTAGTTATGATGGATTAGATGAGAATGAGCAGACAATATTCTTAGACGTTGTTCTTGTTTTCAAGCATTGGCAGAAAAAAAAAGTGACTCAAATTTTGAAAAGTTGTGGTCTTCACCCAACAATTGGAATAAAGGTCTTGATTGAAAAATCTTTACTAGTTGAAACAAAAGATGGCAGATTAGAGATGCATGATTTAATTGAAGAACTGGGTAGGTATATAGTTCTTCAGGAATCTCCCAATGATGTTTGCAAGCGCAGCAGGTTGTGGGAGTTTAAGGACATTAAGGAAGTATTGAAAAATAACAAAGGATCTAAGGCAATACAAGTTATTGCTATGCAAGATAATTATGAGAACCAAGATAGAATAAAAGTACATCGGAAAGCCTTTTCAAAGATGAGTAGACTTAGATTACTCCTCTTAAATTGTCCAACCGACGCACCAACGGGATTGAAGAAACTTTCTGGTGCATTAAAATTTGTTCGATGGCCATCATTTCCTTTGGAAGCTCTTCCATTTCCATTGGATGAACTTGTTCATATTGACATGCAATATAGCAACATAAAGCAACTTTGGAATGGCGTAAAGTCCATGAATCACTTGAAGTTTATCGACATGAGTTGGTCTCCCAATTTTACTGAAACTCCAGACTTCTCAAATGTTCAATCTCTACGACATTTATGTCTTTCTAACTGTGCATCCCTTGTCAAGGTTCATGAATCACTTGGAGTGTTGAAAGAGCTTGTTGAGGTGGACTTGCATGGTTGCGAAAATCTTAACAGCCTACCAAGTAAATTGGAAACAAATTATTTGCGAAAGTTAGATCTTGGAAAGTGTAAAAATGTTAAAAAGCTCCCAGAGTTTGGGGAAGATATGAAGAAATTATCATATCTTGATGCGAGTCACACTGCTATAACCTGTCTTCCTCAATCATTTGGATCCTTGATTGGTCTTGAATATTTAAATCTAAGTGCAACTGGTTTAAGATATCTACCCATTGATTGCTTCTCTGGTCTTTTTGAACTTGTCTGTCTTTCATTGGAGGGTTGCAATTGGCTTCAGTCATTGCCAAGGCTTCCACCACGGCTAATTCGATTACAAGCAAACGGTTGTTGTTCAATGGAATGTTCATTAGATGAACAGATGTTGAATTTGGTGACTTCACTTGACCATGAGTGCCGTGGGCAAATTAAATATGTAATCTCTGATGATGAAGAAGAAGAAAATATGTCGTTCCCTCATAAGAAAGATGATTATCCATTATTGTGGTTGAAGAACGTTGAGCCAGAATATCTCCCCCTTAGGAATTTCTTAGCAATCATGCCATTTGAAGGCAAAATACCATCATGGTTTGATCCAAACATAAAATATTATGGTGAACAAAGATGTGAATGTGTGATAGAAGTGGACATACCTTCAAATTTCCGTGATAGTAAATGGTCGGGAATTGTTGTATGCTTGCATGTCTATGGCCTGTTTGGTTGGATATATTGGAGTAGTAAAGCTCCAGAAGATGATGAATATAATGGATGGGAGGTGACACAAGGTCGTTTGTTTTTAGATAGAGATGATGATGTCTTATGCATAATGGTGTTGGAATTTAATGAGAAAACTTGTTGGCAACACCTAAGAGGTCATAACAATTCCCTTCACATCAAACTTGAGACCGACTTCCTTATCCACGTATTGGGATATGGGTGGAGAGTGATATGTAAAGAAGATATACAAAACTGGTGTAATCCCAGTCGTTTCAACCAATTCACCCAACCCCAACATGCTTCTCCTTCTGGGGTCAAGATTCCCTTGGCATTAGTGCAAAAAGTCCTTTGGGGTCATAAAGTCCTTTAG 3138 0.3735 MENSVQGESSSSSDTFNSTTKWKYDVFLSFTGKDTRLKFVDHLDEAFNRSGIKTFRDDVDLERGGDIKQELFQAIQDSLCAVPIISENYANSTWCLDELQKIFEYGRRVFPIFYDVDPADVRHQRNRFREALAEHEEKFNKNTKKVQNWKNVLFEIGNLSGWDTRGRHEAELIKDIVAKVSTYLHSKLPSYDDNLVGIESRVHDMETILEIGLDDKRGVGIWGMGGVGKTTLARVVYKKISYEFEVCCFIANVRDTLQKEGLVCLQEKLLSDLKIENMKISNQYEGKEMIRKHLSSKKVLLVLDDVDDMSQLENLAKSSDWFGKGSRILITTRDSHVLTLAEVGQRIYEMKAMEKDESIRLFSNEAFKKDHPVEGYWELSRYVVEYAGGLPLALKVLGCYFYMRSKAEWIDALNRMKQVHPHKSILQVLKISYDGLDENEQTIFLDVVLVFKHWQKKKVTQILKSCGLHPTIGIKVLIEKSLLVETKDGRLEMHDLIEELGRYIVLQESPNDVCKRSRLWEFKDIKEVLKNNKGSKAIQVIAMQDNYENQDRIKVHRKAFSKMSRLRLLLLNCPTDAPTGLKKLSGALKFVRWPSFPLEALPFPLDELVHIDMQYSNIKQLWNGVKSMNHLKFIDMSWSPNFTETPDFSNVQSLRHLCLSNCASLVKVHESLGVLKELVEVDLHGCENLNSLPSKLETNYLRKLDLGKCKNVKKLPEFGEDMKKLSYLDASHTAITCLPQSFGSLIGLEYLNLSATGLRYLPIDCFSGLFELVCLSLEGCNWLQSLPRLPPRLIRLQANGCCSMECSLDEQMLNLVTSLDHECRGQIKYVISDDEEEENMSFPHKKDDYPLLWLKNVEPEYLPLRNFLAIMPFEGKIPSWFDPNIKYYGEQRCECVIEVDIPSNFRDSKWSGIVVCLHVYGLFGWIYWSSKAPEDDEYNGWEVTQGRLFLDRDDDVLCIMVLEFNEKTCWQHLRGHNNSLHIKLETDFLIHVLGYGWRVICKEDIQNWCNPSRFNQFTQPQHASPSGVKIPLALVQKVLWGHKVL 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02370 1045 Pfam TIR domain 23 196 IPR000157 GO:0007165
Accr3g02370 1045 Gene3D - 184 346 IPR027417 -
Accr3g02370 1045 ProSiteProfiles TIR domain profile. 22 184 IPR000157 GO:0007165
Accr3g02370 1045 Gene3D - 352 437 IPR042197 -
Accr3g02370 1045 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 446 IPR027417 -
Accr3g02370 1045 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 162 IPR035897 -
Accr3g02370 1045 PRINTS Disease resistance protein signature 387 401 - -
Accr3g02370 1045 PRINTS Disease resistance protein signature 649 665 - -
Accr3g02370 1045 PRINTS Disease resistance protein signature 218 233 - -
Accr3g02370 1045 PRINTS Disease resistance protein signature 293 307 - -
Accr3g02370 1045 SMART till_3 23 159 IPR000157 GO:0007165
Accr3g02370 1045 Gene3D - 16 183 IPR035897 -
Accr3g02370 1045 SMART AAA_5 215 354 IPR003593 GO:0016887
Accr3g02370 1045 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 186 - -
Accr3g02370 1045 SUPERFAMILY L domain-like 556 817 - -
Accr3g02370 1045 Gene3D Ribonuclease Inhibitor 700 824 IPR032675 -
Accr3g02370 1045 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 803 IPR044974 GO:0006952
Accr3g02370 1045 Pfam NB-ARC domain 218 434 IPR002182 GO:0043531
Accr3g02370 1045 Gene3D Ribonuclease Inhibitor 519 699 IPR032675 -
Accr3g02370 1045 SUPERFAMILY "Winged helix" DNA-binding domain 424 530 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02370 Accr-Chr3 48054791 48058599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02370 24 793 WRKY Transcription Factor Family AT4G12020 30.489 2.77e-85 301