Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02358 ATGGAGGACGAGAAGAAGAACAGAGGGTTCGATCAAGAATCCTCCGACGAGCTAGAGAAGATGAGCGAAATGTCGTTTTTGTCTGACTTGGAGCTTGACAAAGGAGAATCTAAGATTAAAATTAACGGAGCTTCAGATTCAGGTTCAGGTTTATTATTACTTCGAGTTTGTGATCTCTGTGGAAAACATTTCAATTCTGGAAAAGCCCTAGGAAGCCACAGGAGACATCACATCCTAGCTCAGAAAAAAATGGAGGCTCAGAATCAGTCTCAACTAGCTTCTGCAGAACAGTTGAATAATGGGTCTTCATCTTCGTCGACCTTGGAAGAATCATCACCACCAGTACAAGTTGATCTTTCTTCATCTTGTTCTGGAAGCAGCTGGCTTAAGAAGGATAAAAGAGGAAGCAAAATCATTGGAGAAGCAGAAGCACCTGAAATTGCAGCTGAAGTCCTTATGTATATATATGCATCTCTATGGTAA 483 0.412 MEDEKKNRGFDQESSDELEKMSEMSFLSDLELDKGESKIKINGASDSGSGLLLLRVCDLCGKHFNSGKALGSHRRHHILAQKKMEAQNQSQLASAEQLNNGSSSSSTLEESSPPVQVDLSSSCSGSSWLKKDKRGSKIIGEAEAPEIAAEVLMYIYASLW 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02358 160 MobiDBLite consensus disorder prediction 83 130 - -
Accr3g02358 160 Pfam C2H2-type zinc finger 56 77 - -
Accr3g02358 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 55 82 IPR013087 -
Accr3g02358 160 MobiDBLite consensus disorder prediction 1 22 - -
Accr3g02358 160 ProSitePatterns Zinc finger C2H2 type domain signature. 57 77 IPR013087 -
Accr3g02358 160 MobiDBLite consensus disorder prediction 83 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02358 Accr-Chr3 47658975 47659457 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr3g02358 zf-C2H2_6 2.1e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02358 K20210 - pcin:129302761 98.5969