Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02356 ATGAGTAAAATGACGGGTGGAGGTGATGCTCCAAGAGTGCCCAGACGTCGGCAGTCCGTGTTTGACATTACAGAAGCAAGACGCAGAGGAGAAGAACATCTGAATAAAGGCCCTTGGACGTTAGCAGAGGATGCAAAATTAATGGCTTATGTCTCACAACATGGAGAAGGAAATTGGAATGCAGTCCAAATGCACTCAGGCCTTTCCCGCTGTGGGAAAAGCTGCCGTCTACGATGGGCAAATCACTTGAGGCCAGAACTAAAAAAGAGTCCACTTACTGAAGAGGAGGAGCGTCGAATCATTGAGCTTCATGCTCAGATGGGAAACAAATGGGCTAAAATGGCAACACAGTTGCCTGGACGTACAGATAATGAAATAAAGAACTACTGGAACACTAGAATTAAGAGAATGCAACGAGCTGGATTACCTCTTTATCCTTCTGAAGTACGCCAGCGGGTACGCAGTCAAGAAAATCAGAATATGGGTACTTTGATGAGTGGAGACAGCCAGCACTCTGAGATCTCACAAGATGGCATCTTCAATATCCCACAACTGGATTTCAAAAATTATGATTTCAGTCGGGCTCATGCATTTGCTCCATCTGGTTTAGATATTCCTGACAGCAGTCTGTTTCAGCAACCTGTAGGCCCACCATATAATGATCTTATTTTCTTTGGAAACAGTGCGAAACACCTTAGGGAGTCAGATATGTTTTATAATAGATTGGACAATAGTAGCAACTATATGATCCCTGCGAATGCGAATTATCCTGCTGAGCCGCCTCTTTTGTCATATCCAAGCAATCTGCCCCTTGACCCCAATTATCTGTTTTGTGGTGATAATCTTCATGGCAGCCATGCCGCTTTAAATGGCACTTTCTCTTCTTCGGCGCCCATACCTGAGGCAATGAAGCCAGAGCTCCCTTCACTCCAATATTTAGAAACTCAACAAGGTAGCTGGGACGCAAATGCATCCCCGCTTCCTTCACTGGAGTCTGCTGATACAATGTTTCAGTCTTCTCCAGTTGAACAGTATCAGTCATTTGCTGTTACTCCAGCTAGTGATGGTTTGTTAGAATCAGTAGTCTATGATACCAGGCTTCCCAGGGGCTCAAATAATAAAGATTCATTGTGGAATACTACTGACGAGTGCATGGTGAATGTGGCTAGAACTGAGACGGAATGGGACCCAAATTCTCCCTTTGGTCACTCTTCTGCTTCTGTTCATACAGTTTATACTCCTGTTAGCATCAGCTCAGTTGATGACCCCCACCACATGGAACACACAAGAGATCATGAAATGAGACAGGAAGCGATTTCTCAGGGTCCACCTCACGTTGGCCAAAGCCAAGAAACTTCCAGTCCGATAGACACAACACGGGTCCACCTCACGTTGGCCAAAGCCAAGAAACTTCCAGTCCGATAG 1425 0.4533 MSKMTGGGDAPRVPRRRQSVFDITEARRRGEEHLNKGPWTLAEDAKLMAYVSQHGEGNWNAVQMHSGLSRCGKSCRLRWANHLRPELKKSPLTEEEERRIIELHAQMGNKWAKMATQLPGRTDNEIKNYWNTRIKRMQRAGLPLYPSEVRQRVRSQENQNMGTLMSGDSQHSEISQDGIFNIPQLDFKNYDFSRAHAFAPSGLDIPDSSLFQQPVGPPYNDLIFFGNSAKHLRESDMFYNRLDNSSNYMIPANANYPAEPPLLSYPSNLPLDPNYLFCGDNLHGSHAALNGTFSSSAPIPEAMKPELPSLQYLETQQGSWDANASPLPSLESADTMFQSSPVEQYQSFAVTPASDGLLESVVYDTRLPRGSNNKDSLWNTTDECMVNVARTETEWDPNSPFGHSSASVHTVYTPVSISSVDDPHHMEHTRDHEMRQEAISQGPPHVGQSQETSSPIDTTRVHLTLAKAKKLPVR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02356 474 ProSiteProfiles Myb-like domain profile. 84 134 IPR001005 -
Accr3g02356 474 CDD SANT 103 132 IPR001005 -
Accr3g02356 474 MobiDBLite consensus disorder prediction 442 460 - -
Accr3g02356 474 SMART sant 35 85 IPR001005 -
Accr3g02356 474 SMART sant 88 136 IPR001005 -
Accr3g02356 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 138 IPR017930 -
Accr3g02356 474 ProSiteProfiles Myb-like domain profile. 31 83 IPR001005 -
Accr3g02356 474 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 28 442 - -
Accr3g02356 474 Gene3D - 36 88 - -
Accr3g02356 474 SUPERFAMILY Homeodomain-like 34 130 IPR009057 -
Accr3g02356 474 Gene3D - 90 163 - -
Accr3g02356 474 MobiDBLite consensus disorder prediction 423 438 - -
Accr3g02356 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 31 83 IPR017930 -
Accr3g02356 474 Pfam Myb-like DNA-binding domain 36 83 IPR001005 -
Accr3g02356 474 Pfam Myb-like DNA-binding domain 91 132 IPR001005 -
Accr3g02356 474 MobiDBLite consensus disorder prediction 423 460 - -
Accr3g02356 474 CDD SANT 38 83 IPR001005 -
Accr3g02356 474 FunFam Transcription factor GAMYB 91 137 - -
Accr3g02356 474 FunFam MYB-related transcription factor 35 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02356 Accr-Chr3 47541685 47546261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02356 34 376 MYB Transcription Factor Family AT2G26960 43.333 3.82e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g02356 Myb_DNA-binding 4.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02356 K09422 - qsa:O6P43_014646 431.795