Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02348 ATGGGGAAAAAAGGAAAGGATCAAACTCCTGAAACGACATATAATGTTGGAGGAAAATCTTCTTCTACCTCGGGGAAAAAAGGAAAGGATCGAACTCCTGAAACGGCATATAATGTTGGAGGAGAATCTTCTTCTACCTCTAATACTCTTATTTCAAGTCCTGAATGTAAGTATGACGTTTTCTTGAGTTTTACAGGGAAAGACACTCGCTTGAATTTCACAGATCACTTATATGAAGCTTTCAGTATAAGCGGCATCAGATGTTTTAAGGATGATGTAGATCTTCCGAAAGGGGAAGACTTAAATTATCTGTTTCGTGCAATTGAGGATTCTTTCTGTGCAGTTCTTGTCATCTCTAAAAATTATGCAAAATCTACATGGTGTTTAGATGAGCTTCAAGAAATTCTTGAATCTGGAGAGAAATTGGGTCGAAGGATTATTCCCATCTTCCATAATGTTGAACCAGCTGATGTAAGACACCAACGAGATAGTTTTGGGGAAGCCTTGGCTGAACATGAAGAGAAATTCAAAGAAAGTCCAACCAAAGTGCGAAATTGGAGAACTGCTTTGTCAAAGATTGGCAACTTGTCAGGCTGGGTCACAAAGGACCAGCATGAAGCAGATCTTATAAAAAAAATAGTTGAAGATGTATGGAGTTTTTTAAGTACTAAATTACCATCTTTTGATGACAATTTGGTTGGAATTGACTCAAAGGTGGCTGATGTGATTCCATTCTTGGAGATTGGGTTAGATGACAAACATTTTGTAGGGATATGGGGGATGGGCGGTGTGGGTAAAACAACTCTAGCAAGAGTTGTTTCTGAAAAACTGGCAGACAAGTTTGATATTTGCTGTTTTCTTGAAAAAGTTAAAGATGCTTTGTGTAAGGAAGGTCTGGTTTATTTGCAAGAAAGTCTTCTTTCTCATCTCAAAATAAAACACTTGAAAATATATGATAGTTATAAAGGAATGAAGATGATAAGAAGTCAGCTCTGCAAGAAAAAGGTCCTCCTTGTCCTTGATGACATAGATGATATGAGACAATTAAAGGATTTGGCTGAAAGCCCAAAATGGTTTGGTAAAGGAAGCAGAATAATTATCACAACAAGAGATAGCCACTTGCTCATCTCATTCGATGTGGAAAGAATATATAAGATGAATACCATGAATGATGATGAATCTCTTCAAATGTTTTCACAAAAAGCATTCAACAAAAATCATCCTGAAGAGAAATATTTGGATTATTCTAAATCTGTGGTTAAATGTGTGGGGGGCCTTCCACTGGCTCTTCAAGCTTTGGGTTCTTATCTTCGTGGTAGAAGGAAAGCTGTGTGGAGAGACGCTTTAGATAAATTGAAGCAAATTAATCCTTACAAAGATATTCTTCAAGTACTTAAACTAAGTTATGATGGATTAGATGAGAAAGAACAGACAATATTTTTAGATATTGTTTTTTTATACAAGGATTGGGATAAAAATGAAGTGACTAAAATATTGAGAGCTTGTGATCTTAATCCGATACTTGGAATAGAGGTCTTGATTGAAAAAACTTTACTAGTTGAGACTAAAGAGGGCAGGTTGGATATGCATGAATTATATGAAGACTTGGGTTGGTTTATAATTGAACAAAAATCCCCCAATAGCAGATTGCGGAAGTATTGGGAAATTAAGGAAGTACTGGAAAATAACAAGGGATTTGAAGAAATAGAAGCTATTGTGTTGGGAGATTATTGGAGCTCATATGAAATAAAATTACATCCTGAAGCCTTTTCAAAGCTGAGTGGTATTAGATCACTCTTCTTACATTGTTCAATCGATCTACCAAGAGGATTGATGAAACTTTCTTGTGGATTAAAATTTGTCAAATGGCCATCATTTCCTTTGGAAGCTCTTCCACTCCCATTGGATGAACTTGTTCATCTTGAAATGCAACAAAGCAACATGAAGCGACTTTGGAATGGCATAAAGATCATGAATCACTTGAAGTTTATTGACTTGAGCGGATCTTACAATTTTATTGAGACTCCAGATTTCTCATGTGTTCAATCCCTAGAATGTTTATGTCTTCGTGGATGCACATCCCTTGTCAAGGTTCATGAATCACTTGGACTATTGAAAGAGCTTGTTAAGGTGGACTTACATGGTTGTGAAAATCTTAATAGCCTACCAAGTAAATTGGAAACAAATTCGTTGAGAGTGTTAGATCTTGGGTTTTGTAAAAAGGTTGAAAAGCTCCCCGAGTTTGGGGAAGGTTTGAAGAAATTATTACATCTTGATGCTAGTTACACTGCTTTAACTACACTTCCTGAATCATTTGGATCCTTGACTGGTCTTAGATTTTTGAAACTAGGGGCAACTGATTTAGTAAATCTACCCACTGATTGCTTCTCTGGTCTTCTTGGACTTGTCTTTCTTTCATTGGTGTCTTGCACATCACTTGTGTCATTGCCAAGGCTTCCACCACAACTATTTCGATTAGAAGCACACCGTTGTTTTTCAATGAAATGTTCTTTAGATGACTGGATATTGAATTTGGTGACTTCACTTGATCATGAGTGCCGTGGGCAAACCAAATATGTAATCTCTGACGAAATAAAAGAAAATATCCCATTTGATTATATGAGAGCAATTTCAAGCGAATATAATTGGGAGGGCATTGAGTTAGATTTTCAATGTAGTGATTTCTTTGCAACCATGCCTTCAGGAGAAGGCGGAAAAATACCATCATGGTTTGATCCAAACATAGAATATTTTGAAATTCCAAGAAAGTATCATCAGATAGTAGTGGATGTACCTCCAAATTTCCGTGCTAGTAAATGGTCAGGAATTGTTGTATGCTTGGACACAAAACGTGTGGTTGGGATTGGAGAGTCGATTGGATGGGAGACAGGTCTAGATCATACCGGTGGTGGTACTTTTATGCGGTTTCTCCGGATGCAAGGAGTATTATCTGGAAGTGATAACCTCATTGTAATGGTGTTGGAATTCAATAAAGAAACCTGTTGGCAACACCTAAGAGGTGAAAACAATTCCCTTAGCATCAAACTTTGTTGTGACATCATGGACGAATGTTTTATTTCCAGCAATGGCAGCGTCCTCTCTGTTGGAGTAATATTGGGATGCGGGTGGAGAGTGATATGTAAAGAAGATATACAAAACTAG 3162 0.3703 MGKKGKDQTPETTYNVGGKSSSTSGKKGKDRTPETAYNVGGESSSTSNTLISSPECKYDVFLSFTGKDTRLNFTDHLYEAFSISGIRCFKDDVDLPKGEDLNYLFRAIEDSFCAVLVISKNYAKSTWCLDELQEILESGEKLGRRIIPIFHNVEPADVRHQRDSFGEALAEHEEKFKESPTKVRNWRTALSKIGNLSGWVTKDQHEADLIKKIVEDVWSFLSTKLPSFDDNLVGIDSKVADVIPFLEIGLDDKHFVGIWGMGGVGKTTLARVVSEKLADKFDICCFLEKVKDALCKEGLVYLQESLLSHLKIKHLKIYDSYKGMKMIRSQLCKKKVLLVLDDIDDMRQLKDLAESPKWFGKGSRIIITTRDSHLLISFDVERIYKMNTMNDDESLQMFSQKAFNKNHPEEKYLDYSKSVVKCVGGLPLALQALGSYLRGRRKAVWRDALDKLKQINPYKDILQVLKLSYDGLDEKEQTIFLDIVFLYKDWDKNEVTKILRACDLNPILGIEVLIEKTLLVETKEGRLDMHELYEDLGWFIIEQKSPNSRLRKYWEIKEVLENNKGFEEIEAIVLGDYWSSYEIKLHPEAFSKLSGIRSLFLHCSIDLPRGLMKLSCGLKFVKWPSFPLEALPLPLDELVHLEMQQSNMKRLWNGIKIMNHLKFIDLSGSYNFIETPDFSCVQSLECLCLRGCTSLVKVHESLGLLKELVKVDLHGCENLNSLPSKLETNSLRVLDLGFCKKVEKLPEFGEGLKKLLHLDASYTALTTLPESFGSLTGLRFLKLGATDLVNLPTDCFSGLLGLVFLSLVSCTSLVSLPRLPPQLFRLEAHRCFSMKCSLDDWILNLVTSLDHECRGQTKYVISDEIKENIPFDYMRAISSEYNWEGIELDFQCSDFFATMPSGEGGKIPSWFDPNIEYFEIPRKYHQIVVDVPPNFRASKWSGIVVCLDTKRVVGIGESIGWETGLDHTGGGTFMRFLRMQGVLSGSDNLIVMVLEFNKETCWQHLRGENNSLSIKLCCDIMDECFISSNGSVLSVGVILGCGWRVICKEDIQN 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02348 1053 ProSiteProfiles TIR domain profile. 56 221 IPR000157 GO:0007165
Accr3g02348 1053 SMART till_3 57 196 IPR000157 GO:0007165
Accr3g02348 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 223 483 IPR027417 -
Accr3g02348 1053 Gene3D Ribonuclease Inhibitor 729 854 IPR032675 -
Accr3g02348 1053 Pfam TIR domain 57 227 IPR000157 GO:0007165
Accr3g02348 1053 MobiDBLite consensus disorder prediction 1 46 - -
Accr3g02348 1053 MobiDBLite consensus disorder prediction 8 23 - -
Accr3g02348 1053 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 58 833 IPR044974 GO:0006952
Accr3g02348 1053 Gene3D - 223 383 IPR027417 -
Accr3g02348 1053 Gene3D - 388 473 IPR042197 -
Accr3g02348 1053 SUPERFAMILY Toll/Interleukin receptor TIR domain 52 199 IPR035897 -
Accr3g02348 1053 SUPERFAMILY L domain-like 574 851 - -
Accr3g02348 1053 Pfam NB-ARC domain 252 470 IPR002182 GO:0043531
Accr3g02348 1053 Gene3D - 52 222 IPR035897 -
Accr3g02348 1053 PRINTS Disease resistance protein signature 330 344 - -
Accr3g02348 1053 PRINTS Disease resistance protein signature 726 742 - -
Accr3g02348 1053 PRINTS Disease resistance protein signature 423 437 - -
Accr3g02348 1053 PRINTS Disease resistance protein signature 255 270 - -
Accr3g02348 1053 Gene3D Ribonuclease Inhibitor 579 728 IPR032675 -
Accr3g02348 1053 FunFam Disease resistance protein (TIR-NBS-LRR class) 54 223 - -
Accr3g02348 1053 SUPERFAMILY "Winged helix" DNA-binding domain 460 559 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02348 Accr-Chr3 47333558 47340293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02348 58 830 WRKY Transcription Factor Family AT4G12020 29.089 6.03e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02348 - - pcin:129303275 882.093