Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02330 ATGGATGGTGTGGGTAAAACAACTCTTGCTAGAGTTGTTTTTGAAAAACTGTCACACAAGTTTGAAATTTGCTGTTTTCTTGAAGGAGTTAAAAATGCTTTGCCTGAAGGTCTAGTCCATTTGCAAAAAAGTCTTCTTTCTCATCTCCATATAAAAGACTTGGAAATATATGATAGTTATAAAGGAATGCAGATGATAAGAACTCGCCTCAGTGAGAAAAAGGTCCTCCTTGTCCTTGACGACATAAATGATAGGAGGCAATTAAGGAATTTGGCTGGAAGTCCAGATTGGTTTGGTAAAGGAAGCAGAATAATTATCACAACAAGATACAAAAAAGTGCTCACTTTACTTAAAGTGGAAAGAATATATGAGATGAAAACCATGAAGAATGATACTTTTAATTCAACTGTTCAATGGGAATATGACGTTTTCTTGAGTTTTGCAGGGAAAGAGACTCGCTTGAATTTCACAGGTCACTTATATGAAGCTCTCATTAGAAGTGGCATAAGATGTTTTAGGGATGATGTAGATCTTCCGAAAGGGGAAGACATAAATGATCTCTTTCGTGAAATTCAGAATTCTCTCTGTGCAGTTCTTGTCATCTCTCAAAATTATGCAAAATCCGCATGGTGTTTGGATGGGCTTCAAAAAATTCTTGAATCTCGAAAGAAATTGGGTGGAAGGATTTTTCCCATATTCTATAATGTTAATCCAGCTGATGTAAGAGAGCAACGAGGAAGTTTTGGGGAAGCCTTGGCTAAACTTGAAAAGAAATTCAAAGAAAATACTACCAAAGTGCAGAGTTGGAGAACTGCTTTGTCAAAAATTGGTGACTTGTCTAGCTGGGTCATTAAGGATGAGCATGAAGCAGATCTTATAAAAAATATAGTTGGAGATGTATGGAGTTTTTTAAGTACTAAATTACCATCTTTTGATGACAATTTGGTTGGAATTCACTCAGAAGTGGCTGATGTGATCCCATTCTTGGAGATTGGGTCAGATGACAAACGTTTTGTAGGGATATGGGGTATGGGTGGTGTGGGTAAAACAACTCTGGCTAAAGTTGTTTTTGAAAAACTATCATACAAGTTTGAAATTTGCTGTTTTCTTGAAAATGTTAAAGATGCTTTGCCTAAAAAAGGTTTGCTCTGTTTGCAAAAAAGTCTTCTTTCTCGTCTACAAATAGAAGAAGTCTTAATATTTGATAGTTATGAAGGGATGCAAAAGATAAGAGAGTTCCTCTGCAATAAAAAAGTTCTTCTTGTCCTTGACAACATAGATGATATGAGCCAATTAAAGGATTTGGCTGAAAGTCCAGATTGGTTTGGTGAAGGAAGCAGAATAATTATCACAACAAGAGATAGCCACTTGCTCACCTCATTTGGAGTGGAAAGAATATATCAGATGAAAACCATGAATGATGATGAATCTCTTCAAATCTTTTCAAAATATGCGTTCAAAAAAAATCATCCTGAAGAGAAGTATTTGGAGTATTCTAAGTCTGTGATTAAATGTGCGGGAGGCCTTCCATTGGCTCTTCAAAATTTGGGTGCTTATCTATGTGGGAGAAGGGAAGAAGCTGTGTGGAGAGATGCTTTAGATAAATTGAAGCAAATCAATCCTTATAAAAATATTCTTCAAGTACTTAAACTAAGTTATGATGGATTAGATGAGAAAGAACAGATAATATTTTTAGATATTGTTTGTCTTTTCAAGCGTTGGAAGAAAGAAGAAGTGACCCAAATTTTGAAAGCTTGTGATCTTAATCCTGTAATTGGAATAAAAGTGTTGATTGAAAAAACTTTACTAGTTGAAATTGAAGGTGGCAAATTAGATATGCATGATTTATATGAAGACCTGGGGCGGTATATAATTCAACAAAAATCCCCCAATAACAGATTGCGGAAGTTTGGGGAAATTAAGGATGTATTGGAAAATAACAAGGGATATGGTGAAATAGAAGCTATTGTTCTGGATAACTATTATGACGAAGAAAAAATAAGAGTACATCCTGAAGCTTTTTCAAAAATGACTAGACTTAGATTACTCCTCTTAAACTGTGAACCCAACGTACCAGCAGGATTGAAGAAACTTTCTAGTGCATTAAAATTTGTCCGATGGCCACGTTTTCCGTTGGAAACTTTTCCACTTCCATTGGATGAGTCCATGAATCACTTGAAGTTTATCAATCTGAGTGAATCTCCCAATTTTACTGAAACTCCAGACTTCTCAAATGTTCAATCTCTAGGACATTTATGTCTTTCTAGATGCGCATCCCTTGTCAAGGTTCATGATTCACTTGGAGTGTTGAAAGAACTTTTTGAGGTTGACTTGCGTGGTTGTGAAAATCTTAACAGCCTACCAAGTAAATTGGAAACAAATTCTTTGAGAAAGTTAGATCTCGGTGGGTGTAAAAATCTTGAAAAGCTCCCAGAGTTTGGGAAAGGTATGAAGAAATTATCATATCTTGATGCGAGTCACACTGCAATAACTACACTTCCTGAATCACTTGGATCCTTGACTAGTCTTAGATGGTTAGATCTAAGGGCGACTGGTTTAATAAATCTACCCACTGATTGCTTCTCTGGTCTTTTTGAACTTGTCTTTCTTTCATTGGAGGGTTGCAAATGGCTTGTGTCATTGCCAAGGCTTCCTCCACAGCTAATTCGTTTAGAAACAAACGGTTGTTATTCAATGAAACGTTCATTAGATGAACAATTGTTGAATTTGGTGACTTCACTTGACCATGAGTGCCGTGGGCAAACTAAATATTTAATCTCTGATGAAGAAGAAAATATGCCATTCCCTTCTGAGAAATATCATGATTTGCCATTCAAGTTGAAGGACGTTGAGCCAGAATATAACCTCAGAAATTTCTTTGCAATCATTCCATCAGGAGACCAAATACCATCATGGTTTGATCCAAACATAAAATATTATGATGAAGAAAGATATGAATGTAAGATAGAAGTGGACGTACCTCCAAATTTTCGTGCTAGTAAATGGTCGGGAATTGTTGTATGCTTGCATTTAAAAGGGCGTGATGGTTTGATTAGTTGGAGTAGTAAAGCTCCAGAAGATGATAAATATAATAGTTGGGCAGAGTGGTTACATCGTATTTGGAGTTTACGTGAACTTGATGGCCTCTGCGTTATGGTGTTGGAATTTAATCAGAAAACCTGTTGGCAATTCCTTAGAGATGATAACAATTCCCTTCAGATCCGACTTTTTTCTCGCGATAAGCATGGAGACGTGGGATATTACATATATGGTAACTTTCCCAAAGCACCTTATATATTGGGATATGGGTGGAGAGTGATATGTAAAGAAGATATACAAAACTGGTGCCATCCAAATCGTTTCAACCAATTCATCCAACCCGAACATGCTCCTCCTTCTGAGGTCAGGATTCCCTCGAGACTACTTCGTAGAGTCCTTGGGTATAGATCACTATATGATTATGGTTATTCATCACTAAATGAGTATGATTATTCATCACTATATGATGATGATTATTCGTCACTATATGATGATGGTTATTCATCAGGTTCGTCAACTTGTCTGGATGTTATAGAAGGTTTGATCAATTTAGGTCCTTAA 3600 0.3631 MDGVGKTTLARVVFEKLSHKFEICCFLEGVKNALPEGLVHLQKSLLSHLHIKDLEIYDSYKGMQMIRTRLSEKKVLLVLDDINDRRQLRNLAGSPDWFGKGSRIIITTRYKKVLTLLKVERIYEMKTMKNDTFNSTVQWEYDVFLSFAGKETRLNFTGHLYEALIRSGIRCFRDDVDLPKGEDINDLFREIQNSLCAVLVISQNYAKSAWCLDGLQKILESRKKLGGRIFPIFYNVNPADVREQRGSFGEALAKLEKKFKENTTKVQSWRTALSKIGDLSSWVIKDEHEADLIKNIVGDVWSFLSTKLPSFDDNLVGIHSEVADVIPFLEIGSDDKRFVGIWGMGGVGKTTLAKVVFEKLSYKFEICCFLENVKDALPKKGLLCLQKSLLSRLQIEEVLIFDSYEGMQKIREFLCNKKVLLVLDNIDDMSQLKDLAESPDWFGEGSRIIITTRDSHLLTSFGVERIYQMKTMNDDESLQIFSKYAFKKNHPEEKYLEYSKSVIKCAGGLPLALQNLGAYLCGRREEAVWRDALDKLKQINPYKNILQVLKLSYDGLDEKEQIIFLDIVCLFKRWKKEEVTQILKACDLNPVIGIKVLIEKTLLVEIEGGKLDMHDLYEDLGRYIIQQKSPNNRLRKFGEIKDVLENNKGYGEIEAIVLDNYYDEEKIRVHPEAFSKMTRLRLLLLNCEPNVPAGLKKLSSALKFVRWPRFPLETFPLPLDESMNHLKFINLSESPNFTETPDFSNVQSLGHLCLSRCASLVKVHDSLGVLKELFEVDLRGCENLNSLPSKLETNSLRKLDLGGCKNLEKLPEFGKGMKKLSYLDASHTAITTLPESLGSLTSLRWLDLRATGLINLPTDCFSGLFELVFLSLEGCKWLVSLPRLPPQLIRLETNGCYSMKRSLDEQLLNLVTSLDHECRGQTKYLISDEEENMPFPSEKYHDLPFKLKDVEPEYNLRNFFAIIPSGDQIPSWFDPNIKYYDEERYECKIEVDVPPNFRASKWSGIVVCLHLKGRDGLISWSSKAPEDDKYNSWAEWLHRIWSLRELDGLCVMVLEFNQKTCWQFLRDDNNSLQIRLFSRDKHGDVGYYIYGNFPKAPYILGYGWRVICKEDIQNWCHPNRFNQFIQPEHAPPSEVRIPSRLLRRVLGYRSLYDYGYSSLNEYDYSSLYDDDYSSLYDDGYSSGSSTCLDVIEGLINLGP 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02330 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 135 IPR027417 -
Accr3g02330 1199 Gene3D - 471 557 IPR042197 -
Accr3g02330 1199 Pfam TIR domain 141 310 IPR000157 GO:0007165
Accr3g02330 1199 PRINTS Disease resistance protein signature 506 520 - -
Accr3g02330 1199 PRINTS Disease resistance protein signature 338 353 - -
Accr3g02330 1199 PRINTS Disease resistance protein signature 413 427 - -
Accr3g02330 1199 PRINTS Disease resistance protein signature 791 807 - -
Accr3g02330 1199 Gene3D - 135 304 IPR035897 -
Accr3g02330 1199 Gene3D Ribonuclease Inhibitor 653 811 IPR032675 -
Accr3g02330 1199 Gene3D - 305 466 IPR027417 -
Accr3g02330 1199 ProSiteProfiles TIR domain profile. 139 308 IPR000157 GO:0007165
Accr3g02330 1199 Gene3D - 1 122 IPR027417 -
Accr3g02330 1199 SUPERFAMILY Toll/Interleukin receptor TIR domain 136 281 IPR035897 -
Accr3g02330 1199 SUPERFAMILY L domain-like 613 896 - -
Accr3g02330 1199 FunFam Disease resistance protein (TIR-NBS-LRR class) 137 306 - -
Accr3g02330 1199 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 306 567 IPR027417 -
Accr3g02330 1199 Gene3D Ribonuclease Inhibitor 812 916 IPR032675 -
Accr3g02330 1199 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 141 812 IPR044974 GO:0006952
Accr3g02330 1199 Pfam Leucine rich repeat 795 851 IPR001611 GO:0005515
Accr3g02330 1199 Pfam NB-ARC domain 325 554 IPR002182 GO:0043531
Accr3g02330 1199 Pfam NB-ARC domain 1 128 IPR002182 GO:0043531
Accr3g02330 1199 SMART till_3 140 279 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02330 Accr-Chr3 45761201 45769346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02330 121 892 WRKY Transcription Factor Family AT4G12020 29.390 2.62e-79 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02330 - - pcin:129303275 897.886