Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02321 ATGCTTCAAAGCTTGGTCCCTCGATCCTCACTTTCTGAGAATCCAAACGGTAATAAATCATCCTCCATGAAAACTAAGCGCGTGGACCGTGACCTCGATGACGCCCGCGGTGACGGTGATGATCCTTCCTCGTTCAAGAGGCCCAGCTCCGGCAGGAATTTCTCCGGCGAGGCTTCTGTCTCTGGCAAGAAGACTGTGGAGGAAGGGGAGGGTCATGAGGATCAGGAGCCACCGTTGGAAGGCTCCGATTCGACGGGTCTCAGACTTCTCGGACTTTTGCTACAATGCGCCGAGTGCGTCGCTATGGACAACCTGGATGAAGCCAGTAACCTTTTACCGGAGATTGCTGAGCTGTCCTCGCCCTACGGTACGTCACCGGAACGCGTCGGCGCGTACTTTGCACACGCCCTTCAGGCGCGCGTTGTTAGCTCCTGCCTCGGAACTTACTCGCCTCTCACCACGAAATCGCACACTCTCATTCAATCCCAGAGAATCTTCAACGCCTTTCAATCCTACAACTCCGTCTCTCCTCTCGTCAAATTCTCGCACTTCACCGCCAACCAAGCCATCTTCCAGGCCCTCGACGGCGAAGATTGCGTCCACGTCATCGACCTGGACATCATGCAGGGCCTTCAATGGCCAGGATTGTTCCACATCCTCGCGTCCCGGTCGAAGAAGATCCGATCAATGAGGATCACCGGGTTCGGATCCTCCGCTGAATTGCTTGAGTCCACCGGCCGGCGACTCGCCGACTTCGCGAGCTCACTCGGCTTGCCGTTCGAATTCCACCCTGTGGAGGGCAAAATCGGGAACATAACCGAACTGAGTCAACTCGGGGTGAGGCCCAACGAGGCCGTAGTGGTCCATTGGATGCACCATTGCTTGTATGATATCACCGGAAGTGATTTGGGGACGTTGAGACTGTTGGCGCTGTTGCGGCCGAAGCTGATCACGACGGTGGAACAGGATCTGAGTCACGCCGGGAGCTTTCTCGCGAGGTTCGTGGAGGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGACGGATTGAGTGGGGACAGCACAGAGAGGCATACGGTGGAGCAGCAGTTGTTTGGGTGCGAGATAAGGAACATTGTGGCCGTCGGTGGGCCCAAGAGGACCGGCGAAGTGAAGGTCGAGAGATGGGGCGATGAGCTGATACGGGTCGGATTCCGACCCGCGTCTCTACGGGGCAACCCGGCTGCCCAAGCGAGCCTCTTGCTGGGTATGTACCCTTGGAGAGGGTACACTCTGGTGGAAGAGAATGGGTGTCTCAAGTTGGGTTGGAAGGATCTTTGTCTTTTGACTGCTTCCGCGTGGCAGCCGTCGGATTAG 1362 0.5698 MLQSLVPRSSLSENPNGNKSSSMKTKRVDRDLDDARGDGDDPSSFKRPSSGRNFSGEASVSGKKTVEEGEGHEDQEPPLEGSDSTGLRLLGLLLQCAECVAMDNLDEASNLLPEIAELSSPYGTSPERVGAYFAHALQARVVSSCLGTYSPLTTKSHTLIQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDCVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSAELLESTGRRLADFASSLGLPFEFHPVEGKIGNITELSQLGVRPNEAVVVHWMHHCLYDITGSDLGTLRLLALLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLSGDSTERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELIRVGFRPASLRGNPAAQASLLLGMYPWRGYTLVEENGCLKLGWKDLCLLTASAWQPSD 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02321 453 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 70 445 IPR005202 -
Accr3g02321 453 MobiDBLite consensus disorder prediction 63 79 - -
Accr3g02321 453 MobiDBLite consensus disorder prediction 1 22 - -
Accr3g02321 453 Pfam GRAS domain family 91 450 IPR005202 -
Accr3g02321 453 MobiDBLite consensus disorder prediction 46 60 - -
Accr3g02321 453 MobiDBLite consensus disorder prediction 23 45 - -
Accr3g02321 453 MobiDBLite consensus disorder prediction 1 83 - -
Accr3g02321 453 ProSiteProfiles GRAS family profile. 80 450 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02321 Accr-Chr3 45144292 45145653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02321 23 453 GRAS Transcription Factor Family AT5G41920 65.138 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g02321 GRAS 1.5e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02321 - - qsa:O6P43_019532 696.427