Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02302 ATGGAACATCCTCTCGGAGGAGAATCTAGCACTTCAAACTCAACAGATGAATCAAAATGGAAATATGATGTTTTCTTGAGTTTTGCAGGAGAAGACACTCGTTTGAGGTTTACGAGTCAGTTGGATGAAGCTTTCAAAAGAAGTGGGATCAAAACGTTTCGGGATGATGTGGATCTTGAGAGAGGGAGAGACATAAGGCAAAATCTCTTTCAAGCAATTGAGGATTCTCTATGTGCAGTCGTTGTTATCTCTGAAAAGTATGCAAATTCTAAATGGTGTTTGGATGAGCTTCAAAAGATTCTTGAGTCTCGAAATACATTGCATCGACGAGTGTTTCCTATCTTCTATGATGTTGACCCAGCGGATGTGAGAAAGCAAGAAAAAAATTTTGGGAACGCCTTGGCTGAACATGAGAAAAAATTTGGAAAAGCCACAAAGAAAGTGCAGAATTGGAGAAATGTTTTGTTTGAAATTAGCAACTTGTCTGGATGGGACACCAGGGGCAAGAATGAAGCAGATGTGATAAAAAATATAGTTGGAGAGGTGTGGACTTATTTAATTTCTAAATTGCCATCTTATAATGACAATCTGGTTGGGATTGACTCAAGAGTGGTTGATCTGATGCCACTCTTAGACGTTGGGTCTAATGAGGTTCGTTTTGTAGGGATATGGAGTATGGGCGGTGCTGGTAAAACAACTCTTGCTAGAGTTGTTTTTGAAAAATTATCCAACATGTATGAAATGTGTTGCTTTCTTGCCAATGTTAGAGAAACTTTGCAAAGAGAAGATCGAGTCTCTGTGCAGAAAAGGATTCTTTCACATCTCAAAGCAACGGATACAGAAATTTTGGATGATTATGAAGGAAGGAAGATGATAAGAAAGCTTTTGTACGGTAAAAAGGTTCTTATTGTCCTTGATGATGTAGATAATCATAACCAATTAAAGAATTTGGTTGAAAGTCCAGATTGGTATGGTGAAGGAAGCAGAATAATTATTACAACAAGAGATAGCCATGTACTCACCGCATTAAGAGTGACAAGAATATATGAGATGAAGATGATGAAGACAGATGAATCTCTTCAACTCTTTTGTAACAAAGCATTCCACAAAGATCAGCCTGAAGAGAATTATTCGAAATTAACTGAATCTGTGGTTGAATATGCTGGAGGTCTTCCCTTGGCACTTGAAATTTTGGGTTCTTTTCTTTGCGGGAGAAGTAAAGCTGAGTGGATAGATGCTTTAGATAGATTGAAGCGAATTCCAGACAATAACATTAATGAAGTACTTAGAATAAGTTATGATGGGTTGGACGAGGAAGAGAAGACAATATTTTTAGATATTGCTTGTTTTTTTAAGGGTTGGAAGAAAAAGGAAGTGATTTTGCTCTTGAAAGGTTGTGATATTCACTCAAAAATTGGAATAAAGGTCTTGATTGAAAAAACTTTACTTGTTGAAACGGGAGCTTGCACACTACAGATGCATGATTTACTTCAAGAGCTGGGTAGGTATATAGTTCGTCAAGAATCTCCAAATGTTGGTGAACGTAGTAGGTTGTGGGAATTTGATGACATCAAGGAAGTATTGGAAAATAACAAGGGATCTGAGAAAATACAAGCTATTGTTGTGCCGCAAAAAAATCGTATTGTGAATATACATTCTGAAGCCTTTTCAAAAATGAGTAACATTAGATTACTCATCTTCAGTCTGAAGGAGTTTAGTACAGTCAAGTCACCAAGGGGATTGAAACTTTCTAGTGCATTAAAAGTTGTTCGATGGCCAAATTTTCAACTCAACGCTCTTCCACTTGAGAATCCATTGGAGAAACTCGTTCATATTGAAATGCCTAATAGCCAAATAAAGCAACTTGGGAATGGCATACAGATTATGAGAAAGTTGAAATTCATCAACTTGAGAAATTCTATGAATTTGGTTGAAACTCCAGACTTCTCAGGAATACCATATTTAGAATATCTATGTCTTTCTCGATGCAAATCCCTTGTCAGGGTTCACCAGTCACTTGGAAAGTTAAAAGCGCTTGCTATGGTGGAATTGGAGCTTTGTATGAATCTTGAGATTCTACCAAGAAAATTGGAAACTAATTCTTTGACGATGTTAAATCTTAGAGGGTGTGAAAAACTTGCAGTGCTCCCAGAGTTTGAGGAAGGTATGAAAAAATTATCATATATTGATATAAGTTGGGCTGCTATAACTAGACTTCCTGAATCACTTGAATCCTTGACTAGTCTTAGAGATTTGAATTTGAGTCTCTGCAAAATTCTTAATCTTGATGACATGTTATTGAAAGTAACGTCGTTAACAAATTTATCTTTAAGAAATTGTGGCTTAAATGATGGATCGATTCCAGATGATTTTGGTAGTTTATCATCACTGGTTGCATTGGATCTAAGCTGGAACAATTTTGTTAATCTACCCTCTGGTTGCTTCTCTAGTCTTTTTCGACTTCGATTTCTCTCATTGGACTCTTGCAAAAGCCTTAAGTCATTGCCAAGGCTTCCGCCACGGTTATTTGGATTACATGCAACCTCTTGTCTCTCAATGGAAACACCTTTATCATCAGATGAACATATATGGAATTTGGTTGCTTCACTTGACCATGAGTGTCGTGGGCGAACTAAGTATTATGTAATCTCTGATGAGGACTATGATGACGATAGGCCACTTGATGAGACAAAAAGTGCTCCTCTGAGAGATTTCTTTGCAATTATTCCAGGACGCGGAATACCATCATGGTTTTCAATGGATACTTTGGAAATGCGATGGCATCATTGTGTGATAGAAGTGAATATACCTCGAGATTTTCGTGACAGTGAATGGTTAGGAATTGTTGTGTGCTTGCCTGTCACATTTTTCAGTAGTATGTTAAAAATTTATTGGAGTACCAAGGCTCCAGAAGATGATGATTTTATACACAAAGAGTGGGGGCATGGTACTGCCCTCTTTTCTCGTTCTGATTGCCAGTGCATAATGGTGTTGGAATTAAATGAGGAAACATGTTGGCAACACCTAAGAGGCCATAACAATTCCCTTCACATTAAATTTGAAATTTACGGAGACCGTGACGCTGAGTTATGTGGATGTGGGTGGAGATTAATACGTAAAGAAGAAATACGACAAGCAGAGAGGTGCAATCTCAATGATTTCAACCAAGTCACCCAACCACAGCTTGCTACTCCTCATGAGGTCAGCCTTCCCTGGAGCGTACTTGGCTACTACATTCGCAGCAAGTAG 3249 0.3789 MEHPLGGESSTSNSTDESKWKYDVFLSFAGEDTRLRFTSQLDEAFKRSGIKTFRDDVDLERGRDIRQNLFQAIEDSLCAVVVISEKYANSKWCLDELQKILESRNTLHRRVFPIFYDVDPADVRKQEKNFGNALAEHEKKFGKATKKVQNWRNVLFEISNLSGWDTRGKNEADVIKNIVGEVWTYLISKLPSYNDNLVGIDSRVVDLMPLLDVGSNEVRFVGIWSMGGAGKTTLARVVFEKLSNMYEMCCFLANVRETLQREDRVSVQKRILSHLKATDTEILDDYEGRKMIRKLLYGKKVLIVLDDVDNHNQLKNLVESPDWYGEGSRIIITTRDSHVLTALRVTRIYEMKMMKTDESLQLFCNKAFHKDQPEENYSKLTESVVEYAGGLPLALEILGSFLCGRSKAEWIDALDRLKRIPDNNINEVLRISYDGLDEEEKTIFLDIACFFKGWKKKEVILLLKGCDIHSKIGIKVLIEKTLLVETGACTLQMHDLLQELGRYIVRQESPNVGERSRLWEFDDIKEVLENNKGSEKIQAIVVPQKNRIVNIHSEAFSKMSNIRLLIFSLKEFSTVKSPRGLKLSSALKVVRWPNFQLNALPLENPLEKLVHIEMPNSQIKQLGNGIQIMRKLKFINLRNSMNLVETPDFSGIPYLEYLCLSRCKSLVRVHQSLGKLKALAMVELELCMNLEILPRKLETNSLTMLNLRGCEKLAVLPEFEEGMKKLSYIDISWAAITRLPESLESLTSLRDLNLSLCKILNLDDMLLKVTSLTNLSLRNCGLNDGSIPDDFGSLSSLVALDLSWNNFVNLPSGCFSSLFRLRFLSLDSCKSLKSLPRLPPRLFGLHATSCLSMETPLSSDEHIWNLVASLDHECRGRTKYYVISDEDYDDDRPLDETKSAPLRDFFAIIPGRGIPSWFSMDTLEMRWHHCVIEVNIPRDFRDSEWLGIVVCLPVTFFSSMLKIYWSTKAPEDDDFIHKEWGHGTALFSRSDCQCIMVLELNEETCWQHLRGHNNSLHIKFEIYGDRDAELCGCGWRLIRKEEIRQAERCNLNDFNQVTQPQLATPHEVSLPWSVLGYYIRSK 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02302 1082 Pfam TIR domain 21 195 IPR000157 GO:0007165
Accr3g02302 1082 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 447 IPR027417 -
Accr3g02302 1082 SMART till_3 21 161 IPR000157 GO:0007165
Accr3g02302 1082 Pfam NB-ARC domain 215 420 IPR002182 GO:0043531
Accr3g02302 1082 Gene3D - 354 437 IPR042197 -
Accr3g02302 1082 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 188 - -
Accr3g02302 1082 SUPERFAMILY L domain-like 493 846 - -
Accr3g02302 1082 PRINTS Disease resistance protein signature 744 760 - -
Accr3g02302 1082 PRINTS Disease resistance protein signature 220 235 - -
Accr3g02302 1082 PRINTS Disease resistance protein signature 295 309 - -
Accr3g02302 1082 PRINTS Disease resistance protein signature 388 402 - -
Accr3g02302 1082 SMART LRR_typ_2 746 769 IPR003591 -
Accr3g02302 1082 SMART LRR_typ_2 794 817 IPR003591 -
Accr3g02302 1082 Gene3D Ribonuclease Inhibitor 536 689 IPR032675 -
Accr3g02302 1082 ProSiteProfiles TIR domain profile. 20 190 IPR000157 GO:0007165
Accr3g02302 1082 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 718 IPR044974 GO:0006952
Accr3g02302 1082 Gene3D - 187 348 IPR027417 -
Accr3g02302 1082 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 164 IPR035897 -
Accr3g02302 1082 Gene3D Ribonuclease Inhibitor 698 852 IPR032675 -
Accr3g02302 1082 Gene3D - 15 186 IPR035897 -
Accr3g02302 1082 FunFam Disease resistance protein (TIR-NBS-LRR class) 355 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02302 Accr-Chr3 44689019 44693755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02302 18 812 WRKY Transcription Factor Family AT4G12020 30.456 3.29e-92 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02302 - - pcin:129303509 1154.81