Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02248 ATGGAGATTGAGGATGCGAGCGGTGGCGGCGGGAGTAATAGAGGACGGAGCAGATATAATGAGAACGGATTAGGTGCGTCCACGGCGGCCAACGGTGGACTTAACAGAGGAAGTTTTTTGGTGTGGGAGGATCTGACGGTGGTGATTCCAAACTTCGGCAAGGGACCGACCAAGAGGTTGCTTAATGGCCTTCATGGCTACGCTGAGCCTGGTAGAATCATGGCTATTATGGGTCCTTCTGGTTCTGGGAAATCCACCTTGCTCGATTCACTTGCAGGGAGGCTCTCAAAAAATGTGGTCATGACAGGAAATATACTTCTCAATGGAAAGAAGAAAAGACTAGATTATGGTGCAGTTGCTTATGTAACACAAGAGGATGTCTTGCTGGGAACTCTCACTGCGAGGGAAACCATATCTTATTCAGCTCATCTACGTCTTCCTAAAAAAATGACCAAAGAAGAAGTAAATGGGATTGTGGAAGGAACAATCATTGAAATGGGACTTCAGGATTGTGCAGATAGGTTGATTGGTAACTGGCACTTAAGAGGCATTAGCGGAGGGGAGAAGAAAAGACTTAGTATTGCTCTTGAAATCCTTACAAGGCCTCGCTTATTGTTTCTTGACGAACCCACCAGTGGCCTTGATAGTGCCTCTGCTTTCTTTGTTGTTCAAACTCTTAGAACTGTTGCTCGTGATGGACGCACAGTTATCTCTTCAATTCACCAGCCAAGTAGTGAAGTGTTTGCTCTCTTTGATGACCTTTTCTTACTATCTGGTGGTGAAACTGTGTATTTTGGAGAAGCAAAGATGGCTGTAGAGTTCTTTGCAGAAGCAGGATTTCCATGCCCACGGAAAAGAAACCCTTCTGATCACTTCTTACGCTGCATCAATTCTGACTTTGACATTGTAACAGCCACTTTGAAGGGATCTCAAAGAATTCGGGATATTCCAAATTCATCAGATCCTTTCATGAACATGGCTACAGCAGAGATTAAGGCTATGCTAGTTGAAAAGTATAGGCGTTCAGTTTATGCTAGAAGGACAAAAGACCGGATTCAAGAACTATCTAACATTGAAGGAATAGAAGCTGAAACACATAAGGGCAGTCAAGCGAGTTGGTGGAAACAACTTGTAACGTTGACGAGGAGATCATTTGTGAACATGAGTAGAGATGTGGGTTACTACTGGTTAAGGATTATAATATATGTCATAGTATCTATATGTGTGGGAACTATATACTTTGATATTGGGTATAGCTATACTTCAATCTTGGCTCGTGGGGCATGCGGTGCATTTATATCAGGTTTTATGACATTCATGTCAATTGGAGGTTTCCCATCATTCATTGAAGAAATGAAGCTTTTCTATCGGGAAAGACATAATGGATACTATGGAGTTTCAGTATATATTTTATCCAATTTCCTTTCTTCTTTCCCATTCTTGGTTGCTGTAGCTCTTACTACTGGCACCATTACCTATAACATGGTGAAATTCCGGCCTGGCTTTGTTCACTTTCTGTTTTTCACTCTCAACATCTTTGGTTGCATTGCTGTAATAGAGAGTCTCATGATGGTCGTAGCTTCACTTGTTCCTAATTTCCTCATGGGAATAATTACTGGAGCTGGAATAATTGGAATCATGATGATGACCTCTGGATTCTTCAGGTTCCTGAATGATCTTCCAAAGCCAGTTTGGCGCTATCCAATATCGTACCTTAGTTATGGCGCCTGGGCTATACAGGGTGCCTACAAGAATGACTTGCTTGGGCTTGAGTTTGAGCCTATGATACCAGGTGACAAAAAATTGAGGGGTGATTTTATCATAACAAACATGTTGGGCATGGGACTGGATCATTCCAAGTGGTGGGATTTGGGAGCTCTATATATCATCCTTGTGGGTTACAGAATTCTCTTCTTTATTGTTCTCAAGTTCAAGGAGAGAGCTTCCCCATTATTTAAGAGACTCCAAGCCAAGAGAACTATACAAGCACTTGAAAAGAGACCTTCTTTCAGGAAAATGCCAAGTTTTCCTTCAAAGAGACATCAGCCTCTCCATTCTCTGTCTTCTCAAGAAGGTCTTAATTCTCCACTCCACTAG 2097 0.4225 MEIEDASGGGGSNRGRSRYNENGLGASTAANGGLNRGSFLVWEDLTVVIPNFGKGPTKRLLNGLHGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNILLNGKKKRLDYGAVAYVTQEDVLLGTLTARETISYSAHLRLPKKMTKEEVNGIVEGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRTVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIRDIPNSSDPFMNMATAEIKAMLVEKYRRSVYARRTKDRIQELSNIEGIEAETHKGSQASWWKQLVTLTRRSFVNMSRDVGYYWLRIIIYVIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKLFYRERHNGYYGVSVYILSNFLSSFPFLVAVALTTGTITYNMVKFRPGFVHFLFFTLNIFGCIAVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRFLNDLPKPVWRYPISYLSYGAWAIQGAYKNDLLGLEFEPMIPGDKKLRGDFIITNMLGMGLDHSKWWDLGALYIILVGYRILFFIVLKFKERASPLFKRLQAKRTIQALEKRPSFRKMPSFPSKRHQPLHSLSSQEGLNSPLH 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02248 698 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524|GO:0016887
Accr3g02248 698 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 36 667 - -
Accr3g02248 698 MobiDBLite consensus disorder prediction 1 20 - -
Accr3g02248 698 FunFam ABC transporter G family member 11 34 278 - -
Accr3g02248 698 MobiDBLite consensus disorder prediction 671 698 - -
Accr3g02248 698 Pfam ABC-2 type transporter 376 585 IPR013525 GO:0016020|GO:0140359
Accr3g02248 698 SMART AAA_5 70 241 IPR003593 GO:0016887
Accr3g02248 698 Gene3D - 34 279 IPR027417 -
Accr3g02248 698 CDD ABCG_EPDR 37 266 - -
Accr3g02248 698 Pfam ABC-2 type transporter 241 298 IPR043926 GO:0140359
Accr3g02248 698 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 40 284 IPR003439 GO:0005524
Accr3g02248 698 Pfam ABC transporter 62 212 IPR003439 GO:0005524
Accr3g02248 698 MobiDBLite consensus disorder prediction 681 698 - -
Accr3g02248 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02248 Accr-Chr3 42442309 42449539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02248 56 253 Calmodulin-binding Proteins AT2G36910 30.144 8.85e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02248 K05681 - gmx:100807692 1163.29