Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02243 ATGATGTCACTCTCACCTAGCTTAGGATCTCCATACCCTTGGCTTAGGGAGCTTAAATCTGAGGAAAGGGGCTTGTACTTAATCCATTTGTTGCTCACTTGTACAAATCATGTAGCTTCTGGTAATCTTGAAAATGCAAATATGGCTCTCGAACAAATTTCCCATCTTGCTTCCCCGGATGGCGATACTATGCAGCGAATTGCTGCATATTTTACTGAAGCACTTGCTGATCGGATACTTAAAGCATGGCCTGGTCTCCACAAGGCCCTCAATTCTACTAGATTAGTTATGGTTTCCGAAGAAATTATGGTCCGGAAGCTGTTCTTTGAGCTGTTTCCGTTCTTGAAGGTGGCATTTGTGCTCACGAATCAGGTCATCATGGAAGCAATGGAAGGAGAGAAAATGGTTCATATAATTGATCTCAATGCTGCTGAACCTGCACAGTGGATTGCACTCCTCCAAGTTTTGAGTGCTCGGCCTGAAGGCCCTCCTCACTTGAGAATTACTGGGGTTCATCAACAGAAAGAGATTCTAGATCAGATGGCTCATAAGCTGATTGAAGAGGCAGAAAAGTTGGACATCCCATTCCAGTTCAATCCTGTTGTGAGCAAGTTAGAGAATCTTGATTTTGACAAACTCCGTGTGAAGACTGGAGAAGCACTAGCAATCAGTTCTATTCTCCAATTACATTCACTTCTGACCTCAGATGATGAAGCTATGCGCAGAAGAACTCCTCTCCTAACAAAATGCTCCAATGGAAGTCATCTACAAAGAGCCGTGCCAATGAACCAAAGCTCATTAGGTGATTTGCTTGAGAAGGATAATAGGTACAGCCCAAGTCCTGACTCGGCCTCATCATCCCCAGCTTCGTCAATTGCTTCAATGAATATGGAGGGCTTTCTCAATGCCTTGTGGGGTTTGTCGCCCAAAGTCATGGTTGTGACAGAACAAGATTCTAATCACAATGGTTCAACGCTAATGGAGAGGCTATTAGAAGCTCTGTACTCTTACGCAGCATTGTTTGATTGTTTGGAATCCACAGTCTCAAGAACATCAATGGAGAGATTGAAGGTGGAGAAGATGCTTTTCGGAGAGGAAATCAAGAACATTGTTGCTTGTGAGGGAGCTGAAAGAAAGGAAAGGCATGAAAAGCTCGATAAGTGGCTGCAAAGGCTCGATCTAGCCGGGTTCGGGAATGTTCCTTTAAGCTATTATGGAATGTTACAAGCAAGGAGGTTACTACAGAGCTATGGTTGTGAAGGATACAAAATGAGGGAAGAAAATGGCTGTGTTGCGATTTGCTGGCAGGATAGGTCACTTTTTTCAGTATCAGCATGGAGACCTAGGAAGTAA 1353 0.4375 MMSLSPSLGSPYPWLRELKSEERGLYLIHLLLTCTNHVASGNLENANMALEQISHLASPDGDTMQRIAAYFTEALADRILKAWPGLHKALNSTRLVMVSEEIMVRKLFFELFPFLKVAFVLTNQVIMEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQQKEILDQMAHKLIEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLTSDDEAMRRRTPLLTKCSNGSHLQRAVPMNQSSLGDLLEKDNRYSPSPDSASSSPASSIASMNMEGFLNALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSMERLKVEKMLFGEEIKNIVACEGAERKERHEKLDKWLQRLDLAGFGNVPLSYYGMLQARRLLQSYGCEGYKMREENGCVAICWQDRSLFSVSAWRPRK 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02243 450 ProSiteProfiles GRAS family profile. 18 447 IPR005202 -
Accr3g02243 450 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 443 IPR005202 -
Accr3g02243 450 Pfam GRAS domain family 27 447 IPR005202 -
Accr3g02243 450 MobiDBLite consensus disorder prediction 270 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02243 Accr-Chr3 42374729 42376081 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02243 2 450 GRAS Transcription Factor Family AT1G50420 70.435 0.0 652
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g02243 GRAS 4.9e-140 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02243 - - tcc:18589932 756.518