Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02239 ATGGGTACTGCTGCTTCAACTTCAAACTCTTCCTCTCAACCAATTTATTCAAAGAACTACGATGTGTTCATCAGTTTCAGAGGAGAGGACACACGCTCAAATTTCACTAGCCATCTTCATACTTCTCTCACCCAAAAATCCTTAAGAACCTTTATTGATTATGAGCTTCCCAAAGGCGATGATATCTCAGAATCTCTCATCCAAGCGATCAAGGATTCGAGTATATCTGTCGTGGTTTTCTCAGAGAATTATGCTTCCTCAAAATGGTGCTTGGATGAACTTGCCCAGATACTCCAATGCAGGAAAGATTCAGGCCAGTTTGTTATTCCTGTGTTCTACAAAGTTGACCCATCTGATGTTCGCAAGCAGAAGGGGGCTTATGAGGAGGCATTTGCAAAACATGAGAGAGATTTCAGGCACAACCCGGATAAATTGAAGAAATGGAGAGATGCTCTCTTTGAAACTGCCAATTTAGCCGGGTGGCACTCTCAATCCTTCAGGGATGAATCTGAACTAATTCAGAACATTGTCAACGATGTTATGCAAAAATTAGATCATAAGCATCCGAGTATATTAGAAGGTCTTGTTGGAATTGATGAAAATTGTGAATGCATTGAATTGTTATTGAGAAAATTTCCAATAATTGGAATTTGGGGAATGGGCGGAATAGGCAAGACAACCACGGCTAAGGTTGTATTTGCCAAACTATCTCCTCAATATCAAAGTTGGTGTTTCTTGGAAAATGTAAGGGAAGAGTCAGAAAAGCATGGATTAAAATATATACGTGATAAACTTGTTTCGGAGCTACTCATGGAAGAAAATATCCATAGTGGCCCCCCTAAAGTGTTGGGATCTACATTTGTTAGGAGAAGGCTTAGCTGCAGAAAAGTGTTCATTGTGCTAGATGATGTTGATAGTTCAAAGCAATTAGACTATCTAGCAAGAGAATGTGATTGCTTGGGACAAGGCAGTAAAGTCATCATAACAACAAGAGATAAGCATATGCTTATTGGTAGAGTTAATGAAATATATGAGGCCAAGCCATTGAGTTATCGAGAATCCTTCAAGCTTTTCAACTTGAAAGCTTTTCACAATGATCATCCTGAAATTGGGTATGAACAGCGATCAAAAAGGGTTGTTACTTATACGAAAGGAAACCCTTTAGCTTTGATAGTTTTGGGTTCTTTTCTTCACTCCAAAACTGAAGAAGAATGGGAGAGTGCGTTAAGAAAATTCAAAAAGACTACAAATGAAGATATTCAGGAAGTCTTAAAATTGAGCTACAATGGGTTAAACTATGAAGAGAAGGAAACATTTCTCGACATTGCATGCTTTTTGAAAGGTGAAGTTAAAGAACATGTAATACAGCTATTAGACAGCTATGGATTCCATGCAAGAATTAGCATTAGAACCCTCCATGATAAAGCTCTTATTACCATGGGTGAAAGATTGTGGATGCACGACCTAATACAAAAAATGGGTTGGGAAATTGTTCGTCAAGAGTGCATCAAAGAACCAGGAAGACGCACAAGATTATGGGACCCCAAAGAAGTCTATGATGTATTGAAAAATAATCGGGGAACTGAAGTTGCTGAAGGCATAATCTTAAATGTGTCTCGAATTAGAGATATGTACTTGGCTGCCGGCACTTTCAAAAAGATGACTAATTTAAGATTCTTGAAATTTTATTCCGTACGCAATACTGGATCATCCAATGTGCACCTTCAGATGGGTCTTGAGTCTATTTCTGATAAACTAAGGTACTTTCAGTGGAATGGGTACCCTTTGGGTTCTTTGCCATCAACTTTTTGTGCAGAGAGCCTTGTTGAATTGAAAATGCAATATAGCCATGTTCAAACACTTTGGGATGGTGTGCAGGATCTTGTGAATTTGAAGAGAATAGATCTTCGTTTTTCAAGAAAACTGAGAGAGTTGCCAGATTTCTCCAAGGCCCATAATCTTGAATTGGTGAATCTATATAACTGTGTAAGTTTGTGTTATGTTCATCCATCTATCTTATCTCTCAACAGCCTTGTGTCTTTGGACTTGAGCAAATGCAAAAACATCAAGAGTCTCCAAAGTTGTACTCATTTAAGATCTCTTAGAAAAGTCCTGATTGGTGGCTGCCCTAATCTGAAGGAATTCTCATTATCATCCAAAGAACTAAGATGCTTATTTTTGGGGTCAACAGGAATAGAAATTCTGCACCCATCGATCGGGAGTCTTACTAAGCTTAGATGTCTTCATCTCAACGGTTCAAAATTGAAGAACCTTCCGCTAAAGGAGTTATGTTGCTTGAGATCTCTTGAGGACCTTCGCATCTCTGAGCATGCATTTGACAAACCTGAGCTACACATGCTATTTGATGCCTTACGTGCTATACAAATACTAAGCTTCCTGAACTGCTCTAACTTAACTGAGCTCCCAAACAACATCAAGCAACTCTCAAAACTTCAAAGGCTTTATTTAAGAAGTTGCAGAAATCTTCAATGTTTACCAGAGCTTCCTCTATCTGTTAAAGAATTAGATATCTCCTACTGCACATCAATTTCAATCAACTGTAATTTGTTGAAGGAAGTAGGATCAATTGGGCATCTTGCCAATCTCAAATATCTGCTTCTCAATGCTTCAAGTCTTGGCAAACTTCCAATAACTGAGTTATGTTGTTTTAGATCTCTCACAGAGCTTCGCCTTTTTGAATGCAGACACCTAGTGAATGAATCAAAGCTACATATGCTATTAGAATCCATGGGATGTCTACAAATCCTAGCTCTAAAGGACTGTTCTAGCCTAACCAAACTTCCCAACAATATTAAACATCTCTCACGGCTGCAACAACTTAATTTGAATGGTTGCACTCGGCTTCAGTTTCTACCACAGCTTCCACTGTCCCTTGTAAGTCTTGTTGCCAGTAATTGTATATCATTAGAGAGAGTGTTCACTTCAACAATTTCAAGATTGCTAAAGGTAAATGGTCATAATTTTATTTCATTTCACAATTGCGAGAAATTAGATGAGCGTTCACGTTGTGCTATTGGGAAACATGTGGAATTCTCATTGAATCAAGCAGTATATAACAAGCAAAGATTTGTAGTATTTTATCCTGGAAACAGTGTTCCATTGTGGTTTGGGTGTAATCGGTCAAAAAATGGTTTGGTAACCATTGAACTTTCTTTGGCTTCTGATCATTTATTGGGTTTTGTTTTCTGTTTGGTTGTTCCTCAATTCATCTCTAAGGAAATAAATCAAATTTCCATGACCTGCAAGTGCTACTTTGAAGAAGGTGAAGCGATTGAATTCCAGATTTTTGATCCAGAATATGCAGAATTCAGCTCAGATCACATTTTACTTTGTTGTGATCCATACTTCTCTAAATGGGTGTTGGAGAGATTGAAAGGAAGCAATGGAAATGATGAGGATACCACTTGTAAGCAAAAGATTTCGTTCATTTTCGTTTCTTGTGACGGCTTCATCCAAGAGTGTGGGGTCTGCCCCATACATGCCTCTGACTATCAGAATTTTGTTCAAAAAAGGAAAAAGAAGTGTGACTTGGGAAGGAGGTCAAAGCGGCATCGAGATATTGATGAATTGGAATTGGAAATCAGTAAATTTAGAATTGGAGTTGGAAACTGTCATGGGAATGAAGCCCTGCCTCTACGCAAGAAATTGAAAATGGAGTTTTGTACTCAGTCCAAGGGACAAGAAGATACTGAAGAATTGGAAGCTTTGCTCATGAGAATCAAAATCAGCTAG 3753 0.3829 MGTAASTSNSSSQPIYSKNYDVFISFRGEDTRSNFTSHLHTSLTQKSLRTFIDYELPKGDDISESLIQAIKDSSISVVVFSENYASSKWCLDELAQILQCRKDSGQFVIPVFYKVDPSDVRKQKGAYEEAFAKHERDFRHNPDKLKKWRDALFETANLAGWHSQSFRDESELIQNIVNDVMQKLDHKHPSILEGLVGIDENCECIELLLRKFPIIGIWGMGGIGKTTTAKVVFAKLSPQYQSWCFLENVREESEKHGLKYIRDKLVSELLMEENIHSGPPKVLGSTFVRRRLSCRKVFIVLDDVDSSKQLDYLARECDCLGQGSKVIITTRDKHMLIGRVNEIYEAKPLSYRESFKLFNLKAFHNDHPEIGYEQRSKRVVTYTKGNPLALIVLGSFLHSKTEEEWESALRKFKKTTNEDIQEVLKLSYNGLNYEEKETFLDIACFLKGEVKEHVIQLLDSYGFHARISIRTLHDKALITMGERLWMHDLIQKMGWEIVRQECIKEPGRRTRLWDPKEVYDVLKNNRGTEVAEGIILNVSRIRDMYLAAGTFKKMTNLRFLKFYSVRNTGSSNVHLQMGLESISDKLRYFQWNGYPLGSLPSTFCAESLVELKMQYSHVQTLWDGVQDLVNLKRIDLRFSRKLRELPDFSKAHNLELVNLYNCVSLCYVHPSILSLNSLVSLDLSKCKNIKSLQSCTHLRSLRKVLIGGCPNLKEFSLSSKELRCLFLGSTGIEILHPSIGSLTKLRCLHLNGSKLKNLPLKELCCLRSLEDLRISEHAFDKPELHMLFDALRAIQILSFLNCSNLTELPNNIKQLSKLQRLYLRSCRNLQCLPELPLSVKELDISYCTSISINCNLLKEVGSIGHLANLKYLLLNASSLGKLPITELCCFRSLTELRLFECRHLVNESKLHMLLESMGCLQILALKDCSSLTKLPNNIKHLSRLQQLNLNGCTRLQFLPQLPLSLVSLVASNCISLERVFTSTISRLLKVNGHNFISFHNCEKLDERSRCAIGKHVEFSLNQAVYNKQRFVVFYPGNSVPLWFGCNRSKNGLVTIELSLASDHLLGFVFCLVVPQFISKEINQISMTCKCYFEEGEAIEFQIFDPEYAEFSSDHILLCCDPYFSKWVLERLKGSNGNDEDTTCKQKISFIFVSCDGFIQECGVCPIHASDYQNFVQKRKKKCDLGRRSKRHRDIDELELEISKFRIGVGNCHGNEALPLRKKLKMEFCTQSKGQEDTEELEALLMRIKIS 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02239 1250 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 442 IPR027417 -
Accr3g02239 1250 Gene3D Ribonuclease Inhibitor 711 841 IPR032675 -
Accr3g02239 1250 Pfam TIR domain 19 190 IPR000157 GO:0007165
Accr3g02239 1250 PRINTS Disease resistance protein signature 291 305 - -
Accr3g02239 1250 PRINTS Disease resistance protein signature 383 397 - -
Accr3g02239 1250 PRINTS Disease resistance protein signature 673 689 - -
Accr3g02239 1250 PRINTS Disease resistance protein signature 214 229 - -
Accr3g02239 1250 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Accr3g02239 1250 SUPERFAMILY L domain-like 789 973 - -
Accr3g02239 1250 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Accr3g02239 1250 FunFam Disease resistance protein RPS4 528 720 - -
Accr3g02239 1250 Pfam NB-ARC domain 214 428 IPR002182 GO:0043531
Accr3g02239 1250 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 851 IPR044974 GO:0006952
Accr3g02239 1250 Pfam Leucine Rich Repeat 608 626 IPR011713 -
Accr3g02239 1250 Gene3D - 183 341 IPR027417 -
Accr3g02239 1250 Gene3D - 16 182 IPR035897 -
Accr3g02239 1250 Gene3D Ribonuclease Inhibitor 521 710 IPR032675 -
Accr3g02239 1250 Gene3D Ribonuclease Inhibitor 842 989 IPR032675 -
Accr3g02239 1250 SMART till_3 19 158 IPR000157 GO:0007165
Accr3g02239 1250 Gene3D - 349 432 IPR042197 -
Accr3g02239 1250 SUPERFAMILY L domain-like 485 847 - -
Accr3g02239 1250 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02239 Accr-Chr3 42268693 42272992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02239 17 828 WRKY Transcription Factor Family AT4G12020 32.335 1.35e-100 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02239 - - pcin:129288608 2050.02