Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02128 ATGTCGTGCTCCGTCGCCCTCTCGAACTCTCCGGTCTTCTCTCCGTCGGCTTGCCTCTTCTGCAACAAACCCTCCGTCGTCATCTCTTCCTCGCCGGAATCCCTTCCTCTCTCTTTGTCTCACCTCAAACCTTCCGCTTCTGCTTCATCTTCTTCATCGCCTTCTTCGCCTTCCTCGCCTTTCCGCCTCCGCCTCCTCAAGCCTCCTACTCCCACCGCCCTTTCCAATTCCGCCTCCGCCTCCGCCTCCGCCTCCGCTCCTTCCTCCTCTTCCACCTCGCCTAACGGTGCCGTTTTGAAGAGGAAGAGGCCCGCAAGGCTTGCTATTCCCGTCTCGTCTCTCTCTTTTGGGGCTACGGCGACGCCGTCTTCCTCGGTGGTGGCCCGAGATGTTCTAGAGGTCGAAGGGCTTGGGTTCTCCGTATATTGTAAGAGAGGCCGCCGGGAGTACATGGAAGATCGTTATTCTGCTGCCGTCAATCTTCAAGGACAACCCAAACAAGCTTTCTTTGGCATATTTGATGGACACGGAGGTTCAAAAGCTGCTGAATTTGCAGCACAAAACTTAGAAAAGAACGTCATGGATGAAGTGACTAAAAGAGATGAAGATGATGACATAGAGGAGGCAGTGAAACATGGCTACCTGAACACTGATTCTGATTTCTTAAAAAAGGACCTCCATGGTGGATCCTGCTGTGTAACAGCACTGATCAGGAATGGAAACCTTGTTGTCTCTAACGCGGGCGATTGCCGTGCTGTTATTAGCCGAGGTGGCGTCGCAGAAGCCCTCACATCTGATCACAGACCTTCAAGGGAAGATGAAAAGGAGAGAATTGAGACCACAGGTGGCTATGTTGATTTTTGCCGTGGGGTTTGGAGGATTCAGGGGTCCCTAGCCGTTTCCAGAGGAATTGGAGATCGGTATTTGAAGCAATGGGTGATAGCTGAACCTGAGACTAAAGTTCTCAGGATTGAACCTGAACATGACTTGTTGATATTAGCTTCAGATGGATTATGGGATAAGGTTAGTAACCAGGAAGCTGTGGATATTGCTCGTAATATGGCACAACCATTGATGGCCTGTAAAAAGCTTGTAGATTTGTCTGTTTCACGAGGCTCAAGTGATGACACAAGTGTTATGGTGGTAAAACTGGGACACTTTATATAA 1167 0.5004 MSCSVALSNSPVFSPSACLFCNKPSVVISSSPESLPLSLSHLKPSASASSSSSPSSPSSPFRLRLLKPPTPTALSNSASASASASAPSSSSTSPNGAVLKRKRPARLAIPVSSLSFGATATPSSSVVARDVLEVEGLGFSVYCKRGRREYMEDRYSAAVNLQGQPKQAFFGIFDGHGGSKAAEFAAQNLEKNVMDEVTKRDEDDDIEEAVKHGYLNTDSDFLKKDLHGGSCCVTALIRNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDEKERIETTGGYVDFCRGVWRIQGSLAVSRGIGDRYLKQWVIAEPETKVLRIEPEHDLLILASDGLWDKVSNQEAVDIARNMAQPLMACKKLVDLSVSRGSSDDTSVMVVKLGHFI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02128 388 ProSiteProfiles PPM-type phosphatase domain profile. 138 384 IPR001932 -
Accr3g02128 388 ProSitePatterns PPM-type phosphatase domain signature. 169 177 IPR000222 GO:0043169
Accr3g02128 388 PANTHER PROTEIN PHOSPHATASE 2C 84 383 IPR015655 GO:0004722|GO:0006470
Accr3g02128 388 MobiDBLite consensus disorder prediction 41 60 - -
Accr3g02128 388 Pfam Protein phosphatase 2C 139 376 IPR001932 -
Accr3g02128 388 MobiDBLite consensus disorder prediction 70 97 - -
Accr3g02128 388 SMART PP2C_SIG_2 146 384 IPR001932 -
Accr3g02128 388 MobiDBLite consensus disorder prediction 41 101 - -
Accr3g02128 388 FunFam probable protein phosphatase 2C 25 131 387 - -
Accr3g02128 388 SUPERFAMILY PP2C-like 135 385 IPR036457 -
Accr3g02128 388 SMART PP2C_4 128 382 IPR001932 -
Accr3g02128 388 Gene3D - 136 387 IPR036457 -
Accr3g02128 388 CDD PP2Cc 138 384 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02128 Accr-Chr3 37742552 37744400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02128 1 388 PP2C-type Phosphatase Gene Family AT2G30020 63.682 1.32e-166 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02128 K17506 - gmx:100797934 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr4g01497 4 15138869 15140534 Accr3g02128 3 37742552 37744400 CCT
Accr3g02128 3 37742552 37744400 Accr3g02128 3 37742552 37744400 ECH
Accr4g01497 4 15138869 15140534 Accr3g02128 3 37742552 37744400 ECH