Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02088 ATGGCTGGGATTGATGATAGTGTTACTTTAAATTGCGACTGGGGCCCTCCTAGTCCGAGTCCAAGATCATTTTTCTCTAAAGTGCTAGGTGAAGATAATCTTTCAAGACAAATCTCAGAGCCTCTTGGAAATGGTAGAACTAAGGAGCTCTTTGTGCAACAAAATCAAGAGCTCATTATGACCGGGAATTTCAACACAAGAGATATGGCACCACAAGATGACGATTCTGGTTGCCAATTTAATGACACAACTTCTTTGTCTGGGAATAAGTCTAGCTCGCGAGGAAACCTTGTTGAAAGGATGGCTGCTAGAGCTGGATTTAATGCCCCAAGGTTGAATACAGAAAGCATTAGATCAGCTGATCCTATGATGAATTCGGACACTCGATCTGCTTACTTAACCATACCACCTGGACTCAGTCCGACCACACTTTTAGAGTCTCCAGTATTCCTTTCTAATTCGCTGGCACAACCGTCTCCAACAACCGGGAAGTTTCCATTTAGCACAAATGGCAATGCTCGGGGTTTGGAACTGAACCCTGGTGCTACTGGAAAAACTAAAGATTACAACTTTGATGACATTTATGCATCATCGTTTGCTTTCAAGACTTCAACAACAGATTTGGACTCTTTCTATAATGGTGCTGCTAGAAAAATGAATCGAACCATGCTGCCAGAAGAATATATTACTGCTGAGGTCTCAGCTCTAGATTTGACTAACCCTCCCGCTCAAAATGACAGTAGAGCATCAGTTGATGAACCAGCAGATGAAGGAGGAGGTCAAAGAGGAAATGGAGATTCACAGGCTGCTGGTGTTGGGGGTACACCATCTGAAGATGGATATAACTGGAGAAAGTATGGACAGAAACAAGTTAAAGGTAGTGAGTATCCACGAAGTTACTACAAGTGTACGCACACGAATTGCCCAGTAAAGAAGAAAGTGGAACGATCTCATGAGGGCCACATAACAGAAATAATCTACAAGGGTAATCACAACCATCCGAAACCGCCCACAAATCGCAGATCTGCTTTAGGGTCTGTTAACGCTCTCGGTGACATGCAAGCAGACGCATCTGAACGTACTGAACCACATGGTGTGGGTGATGGTGAACTGGGCTGGACAAGTACACAAAAAGGAAATATGTCTGGAAATGCGGACTCGAAGCATGAGAACCTTGAAGTGACCTCTTCAGCAGCATGTGTGGGACCTGAATTTGGCAACCAGTCCACCAATTTGCAGGGTCAGAATGGTGCTCAATTTGAATCAGGAGATGCAGTGGATGGCTCATCTACTTTCTCTAACGATGAGGATGATGATGACAGGGCCACTCATGGCAGTGTATCAGGAGGTTATGATGGAGAAGGAGATGAATCAGAGTCTAAAAGAAGAAAACTGGAATCTTATCCAAATACAGCAGAATTGAGTGGAGCCACTAGAGCTATTCGGGAGCCTAGAGTTGTTGTTCAAACTACCAGTGACATAGATATCCTCGACGATGGATACCGTTGGCGTAAATATGGACAAAAAGTTGTCAAGGGAAATCCTAATCCCAGGAGTTACTATAAGTGCACCAATGCGGGTTGCACAGTGAGGAAGCATGTGGAGAGAGCATCACATGACCTGAAATCTGTGATTACTACATATGAAGGAAAGCACAATCATGATGTTCCTGCGGCTCGCAATAGCAACCAAGGCAATAATGCTGCAGTTTCTGGTGCTGCTGCTGCTCAAGCTTCTTTTATTCACAGTCACAGAGGTGAGGGTTCACAAGTTCACAACGGTATGGGAAGGCTTGAGAGGCCTGTTTTGGGCCTGGGCTCGTTCAACTTACCCGGGGCTGGGCCCGGGAGGCCACAATTAGGGCCTTCTTATGGCTTTTCATTCGGAATGGGAATGAATCAATCAGGCTTCCCCAATATAGCCACCATGGCAGCTTTGGGCCCGGCCCATGCTAAGCATCCTGTCATGCCGGTTCATCCGTTCTTGCCCAATCAACGTCCACCAAACATGGGCTTCATGTTGCCCAAAGGAGAGCCCAATTTGGAGCCTATTCCTGATCGCGAGCTTAATATGCCCGCTGGTTCGTCAGTATATCAGGATATAATGAATCGGATGCCACTTGGACCCCATATGTAA 2136 0.4569 MAGIDDSVTLNCDWGPPSPSPRSFFSKVLGEDNLSRQISEPLGNGRTKELFVQQNQELIMTGNFNTRDMAPQDDDSGCQFNDTTSLSGNKSSSRGNLVERMAARAGFNAPRLNTESIRSADPMMNSDTRSAYLTIPPGLSPTTLLESPVFLSNSLAQPSPTTGKFPFSTNGNARGLELNPGATGKTKDYNFDDIYASSFAFKTSTTDLDSFYNGAARKMNRTMLPEEYITAEVSALDLTNPPAQNDSRASVDEPADEGGGQRGNGDSQAAGVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHTNCPVKKKVERSHEGHITEIIYKGNHNHPKPPTNRRSALGSVNALGDMQADASERTEPHGVGDGELGWTSTQKGNMSGNADSKHENLEVTSSAACVGPEFGNQSTNLQGQNGAQFESGDAVDGSSTFSNDEDDDDRATHGSVSGGYDGEGDESESKRRKLESYPNTAELSGATRAIREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSNQGNNAAVSGAAAAQASFIHSHRGEGSQVHNGMGRLERPVLGLGSFNLPGAGPGRPQLGPSYGFSFGMGMNQSGFPNIATMAALGPAHAKHPVMPVHPFLPNQRPPNMGFMLPKGEPNLEPIPDRELNMPAGSSVYQDIMNRMPLGPHM 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02088 711 SUPERFAMILY WRKY DNA-binding domain 275 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 MobiDBLite consensus disorder prediction 66 95 - -
Accr3g02088 711 FunFam WRKY transcription factor 33 484 550 - -
Accr3g02088 711 ProSiteProfiles WRKY domain profile. 278 336 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 MobiDBLite consensus disorder prediction 405 430 - -
Accr3g02088 711 SMART WRKY_cls 497 556 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 SMART WRKY_cls 277 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 MobiDBLite consensus disorder prediction 235 284 - -
Accr3g02088 711 MobiDBLite consensus disorder prediction 405 471 - -
Accr3g02088 711 Pfam WRKY DNA -binding domain 278 334 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 Pfam WRKY DNA -binding domain 498 554 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 SUPERFAMILY WRKY DNA-binding domain 489 557 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 Gene3D WRKY domain 484 550 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 145 574 IPR044810 GO:0003700
Accr3g02088 711 FunFam WRKY transcription factor 267 337 - -
Accr3g02088 711 ProSiteProfiles WRKY domain profile. 492 557 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 Gene3D WRKY domain 270 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr3g02088 711 MobiDBLite consensus disorder prediction 356 391 - -
Accr3g02088 711 MobiDBLite consensus disorder prediction 373 391 - -
Accr3g02088 711 MobiDBLite consensus disorder prediction 454 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02088 Accr-Chr3 34100624 34104317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02088 1 706 WRKY Transcription Factor Family AT5G56270 49.132 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr3g02088 WRKY 3.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02088 K18835 - gmx:100796545 876.315