Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02073 ATGACGTCAGGAAACCGATGCCACTATGAAGTTCTTGGCCTAGAGCGAGATTGTACTCCTGATGAAATACGGTCAGCATATAGGCGTCTCGCCCTTCAGCGCCACCCTGACAAACTTGTCAAATCTGGCTTATCACAAGTTGAAGCTACAGCTCAATTCCAGGAGCTCCAACATGCCTATGAAGTCCTTTCTGACCCTAAGGAGCGAGCATGGTATGATTCCCACCGGTCTCAGATTCTCTTTTCTGATCCCAACTCAGTTGGAAAGTCAGACCCCAACTCGTTCATCCCGAACCTGTTTTCCTTCTTCTCTACAAATGTTTACTCTGGATATTCAGGCACTGGCAAGGGATTCTACATGGTTTATTCTGATGTTTTTGATAAAATTCATGCTAATGAAATTAACTTTGCTAAGAAATTGGGACTAGGTATTGATGTGGTTCGACAAGCCCCAGTAATGGGCAATTTGGATAGCCCCTATACTCAAGTGACAGCATTTTACAATTACTGGCTGGGATTTTCAACAGTTATGGATTTTTGTTGGGTGGATGAGTATAATGTCATGGCTGGTCCTAACCGGAAGTCAAGGCGTCTTATGGAGGAAGAGAACAGCAAGATTAGAAAGAAGGCAAAGAAAGAGTATAATGACACAGTGCGGAAGTTGGCTGATTTTGTCAAGAAGAGGGATAAAAGGGTGATTGATATGAAGATGAAGAAGAATTTGGAGATGGAAAAAAAGAAAGAGGAGGAGAGGGAGAGGAAGAGGCAGATGGAGAAGGAGAAAAAGGATAGGGTAATGGCATATGAAGAGCCTGAGTGGGCCCAATTGGAGGAGGATGAAGAAGATGAGGCTGATTGGTTTGAGGTGGGGAGTAAGAAGAAGAATGCTGAGAATGAGTTTTATTGTGTACTGTGTGGCAAGAAGTTCAAGAGTGAGAGGCAATGGAAGAACCATGAGCAATCAAAGAAGCATAAGGAGAAAGTTGCGGAATTTAGGGATTCACTTGATGATGAAGAGGAGGTGGAGGTAGAGTTGGAAGAAGTGGAGGCGGAAGAAAGAGAAGGAAAGCTGAGCTCTGAAAGTTATGAAGACAAAATTGGGGTGAGTGATGATATATCTGGGAGCACTGATAATGAGATTGATGATTTAGAAGGGAGAATTAGAGATGATCTCAATGTTGCAGAGGAGGTGACAACAAATGGGGTTGAGTTGAATGAAGAAGACGAAGAAGAGAAAGAAGAATATGTCAATGCCCAGCATCCAGAGGTGGAGGAGGCTGGCACCTCAGTGAATTTTGATGGAGAAGAAGATGATGAATTGGGTATCCTTGAATCGATGCTGGCTGGGCAAAGGAGCAGAAAAACTGGTGCCTCAAGGCAGGAGCAGAAGGCTTCAGTGTGTACATCTCAAAATGATACTAAGAGCGATGAGGTTGGTTTTATGGAATATGATAACAGAAAGAGTTCAAAAAAGAAACGTGGAGCTAAAAAAGAGAGAGGAAGAAAAAATAGTGAAGAATTGAAGGCGACTACTAGTAACAGTGATTTTCAGAATGAAAAAAATATTAACGGTGAAGCGTCTCAGGCTGAAGACTCTTCTCCACATAATGTGGGAAACGAGAATAATATTACAGAAAATGAGCAGGTCCATAAAGATAAGAAGGCTTCTACACAACGTATTGATAAAAAAGGAGCTGTAAAGAATACAATAGCCAATGGAAAAACCAAAACAAGAAAAGCCAAGGGTGCATCAAAGAATCTTGCCAATATATGCGAGGCTTGCGGAGATGAGTTTGAATCAAGGAATCAATTGCATAAACATCTCGAGGAAACCGGGCATGCGACAATAAAATCCACAAGGAGGCATCGCTAG 1872 0.4231 MTSGNRCHYEVLGLERDCTPDEIRSAYRRLALQRHPDKLVKSGLSQVEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSVGKSDPNSFIPNLFSFFSTNVYSGYSGTGKGFYMVYSDVFDKIHANEINFAKKLGLGIDVVRQAPVMGNLDSPYTQVTAFYNYWLGFSTVMDFCWVDEYNVMAGPNRKSRRLMEEENSKIRKKAKKEYNDTVRKLADFVKKRDKRVIDMKMKKNLEMEKKKEEERERKRQMEKEKKDRVMAYEEPEWAQLEEDEEDEADWFEVGSKKKNAENEFYCVLCGKKFKSERQWKNHEQSKKHKEKVAEFRDSLDDEEEVEVELEEVEAEEREGKLSSESYEDKIGVSDDISGSTDNEIDDLEGRIRDDLNVAEEVTTNGVELNEEDEEEKEEYVNAQHPEVEEAGTSVNFDGEEDDELGILESMLAGQRSRKTGASRQEQKASVCTSQNDTKSDEVGFMEYDNRKSSKKKRGAKKERGRKNSEELKATTSNSDFQNEKNINGEASQAEDSSPHNVGNENNITENEQVHKDKKASTQRIDKKGAVKNTIANGKTKTRKAKGASKNLANICEACGDEFESRNQLHKHLEETGHATIKSTRRHR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02073 623 SMART ZnF_U1_5 297 331 IPR003604 GO:0003676|GO:0008270
Accr3g02073 623 MobiDBLite consensus disorder prediction 379 393 - -
Accr3g02073 623 ProSiteProfiles Zinc finger C2H2 type domain profile. 589 618 IPR013087 -
Accr3g02073 623 SUPERFAMILY Chaperone J-domain 4 103 IPR036869 -
Accr3g02073 623 MobiDBLite consensus disorder prediction 509 544 - -
Accr3g02073 623 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Accr3g02073 623 SMART dnaj_3 6 68 IPR001623 -
Accr3g02073 623 SUPERFAMILY beta-beta-alpha zinc fingers 295 342 IPR036236 -
Accr3g02073 623 ProSitePatterns Zinc finger C2H2 type domain signature. 302 324 IPR013087 -
Accr3g02073 623 MobiDBLite consensus disorder prediction 451 476 - -
Accr3g02073 623 MobiDBLite consensus disorder prediction 312 559 - -
Accr3g02073 623 Pfam Zinc-finger double-stranded RNA-binding 300 325 IPR022755 -
Accr3g02073 623 SMART c2h2final6 589 613 IPR013087 -
Accr3g02073 623 SMART c2h2final6 300 324 IPR013087 -
Accr3g02073 623 MobiDBLite consensus disorder prediction 545 559 - -
Accr3g02073 623 MobiDBLite consensus disorder prediction 244 266 - -
Accr3g02073 623 Gene3D Classic Zinc Finger 289 352 - -
Accr3g02073 623 MobiDBLite consensus disorder prediction 335 349 - -
Accr3g02073 623 MobiDBLite consensus disorder prediction 312 334 - -
Accr3g02073 623 PRINTS DnaJ domain signature 27 42 IPR001623 -
Accr3g02073 623 PRINTS DnaJ domain signature 9 27 IPR001623 -
Accr3g02073 623 PRINTS DnaJ domain signature 48 68 IPR001623 -
Accr3g02073 623 Gene3D DnaJ domain 1 88 IPR036869 -
Accr3g02073 623 ProSiteProfiles dnaJ domain profile. 7 76 IPR001623 -
Accr3g02073 623 MobiDBLite consensus disorder prediction 350 367 - -
Accr3g02073 623 ProSiteProfiles Zinc finger C2H2 type domain profile. 300 329 IPR013087 -
Accr3g02073 623 CDD DnaJ 7 65 IPR001623 -
Accr3g02073 623 Coils Coil 233 263 - -
Accr3g02073 623 Pfam DnaJ domain 8 73 IPR001623 -
Accr3g02073 623 Coils Coil 321 351 - -
Accr3g02073 623 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 3 618 IPR044648 -
Accr3g02073 623 ProSitePatterns Zinc finger C2H2 type domain signature. 591 613 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02073 Accr-Chr3 33087401 33090056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02073 6 618 C2H2 Transcription Factor Family AT1G74250 49.388 2.67e-177 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr3g02073 DnaJ 7.7e-22 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02073 K09506 - gmx:100788305 712.99