Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02028 ATGGCTTCTGAAATGGAAGTTCACACCACAGCCCATAACTCCGCCGGCGCCGGAGATTATCATCTCCGGTTTCCCCGTCAGAGTAGTGTGGTGGCTTCCTCCCTATTATCCACCGTAGATAAAGCAGCAGCAGCAGCAGCAGCTTCAAGTAGTAATAACAGTAAGTATAATAGCTATCATTGTAAATCTGGCTCACGCGATAATGTTCCTATTCCTAACCCCACAACAGTGACTCTCTCCAACAACTACTCCACTACCACTCTTCTACCTTCTTCCACTAATCTCACCACCGTGACGTCACCCAGCTATACCAACCGTCACTGCGGTGAAAACCTCTCTCTTCTTCATCTTCAAGCCTTTCAACCTCAGACCCAGCAGGACCCTTCGCCTCCTACTCCTGCGGTGTGTGGATTTTCTGGCTTGCCTTTATTTCCTTCTGAAAGTAATCGGGTTGATAATACCGGTAACAGTACTGCTGCGGCCGTCGACGGTATTGCTTCGGTGGCCACAAACGCCGACGCCAGCCGACCTTCTTGTACCTCATCTTCTATGGAGGATAGTTCAGCTTTGGCTTGGATCGACGGCATCTTGAAGGATCTCATCCATGGCTCCACCGCCGTGTCCATCCCGCAACTCATCAACAACGTTAGGGAGATTATTTATCCTTGTAATCCCAACCTCGCTGTCATTCTTGAATACAGACTCCGCCTCCTCACTTCCGCCAATACTACTGAATCTGTTCTAACTTATGGTGATAAGAAGAGGACGGAACCGCCGCCTCCTCCTCCGATGGTGCCGGTGGCGGCCGTGGGTTTAAACCAGAGGCCTTTTGGTCAGCAAGTAGTAGGCCCCTCTTTTGCCGCCATAGCTCCCAACTTGCATATTCCAAACTCTTCCATTGTTTCTCCATCTGTTGGGAACAATATGTACTCAAATTGGGGACTACCACCTACGATGACGGCCTTAACCCATGACGGCGCCAACCACCCGTCGGTGATTACCTTACCACTATCACCACTATCATCGTCAAATCATCAAGGTCATTCGCCACAGGAAGAGCAACAATTTCACGAGAAAGAACAAGAGAATCAGAACCAGCAACAAGAAGAGGGGGTTTCCGTTTCTTCCCCTTCTGATAATAATCGAACAGCAGTAACAACGGCCGCGGCAGTGGGCGGCGCAGCTGCAGAAATCATGCTAGCGAAAAAGAAGAAAGAGGAGATGCAGCAACAGAAGAGAGACGAAGAAGGCTTACACCTTCTAACTTTGCTGCTTCAGTGTGCGGAGGCTGTGGCGGCTGATAACTTCGATGAAGCCAATAAAATGTTGCTGGAGATTTCACAACTCTCCACACCGTTCGGCACGTCGGCGCAGCGGGTGGCGGCGTATTTCTCGGAAGCCATTTCTGCGAGGCTGATTAACTCATGCTTGGGAATATACGCTACTCTTCCAATGATTCCTCATAGCCAAAAGATGGTATCAGCTTTCCAAGTTTTCAATGGGATTAGTCCTTTCGTCAAGTTCTCACACTTCACAGCGAATCAAGCTATACAAGAAGCTTTCGAGAGGGAAGGGAGGGTACACATCATAGATCTGGACATAATGCAAGGATTACAATGGCCTGGCTTGTTTCACATTCTGGCTTCAAGAGCTGGTGGACCCCCTTACGTCAGGCTTACGGGGCTTGGCACCTCCATGGAAGCTCTTGAAGCTACGGGCAAGAGGTTGTCTGATTTTGCAAATAAATTGGGACTTCCTTTTGAGTTCTTTCCGGTGGCCGACAAAGTTGGGAATCTTGACCCTGAGAAATTATGTGTAAGCAAGACAGAAGCTGTGGCCGTCCACTGGCTCCAACATTCCCTTTATGATGTCACTGGCTCTGATACTAATACTTTGTGGCTTTTGCAAAGGTTGGCACCTAAAGTGGTGACGGTGGTGGAGCAGGATCTGAGCCATGCGGGGTCATTCTTAGGGAGGTTTGTGGAAGCCATACATTACTACTCAGCACTATTTGATTCTCTGGGATCAAGCTATGGGGAGGAGAGTGAGGAGAGACACGTGGTGGAGCAGCAGCTCCTGTCGAGGGAGATTCGAAACGTGCTGGCTGTCGGAGGTCCGTCGAGGACCGGCGAGCTCAAGTTCCATAACTGGCGGGAGAAGCTTCAGCAATGTGGGTTCCGAGGTATCTCCCTCGCCGGAAACGCCGCCACGCAAGCGAGCCTTCTTCTCGGCATGTTCCCTTCCGATGGGTATACCTTGGTGGAAGATAATGGCACACTCAAACTTGGTTGGAAAGATCTCTGCTTGCTTACTGCTTCTGCTTGGAGACCTTCCTTCCATAATAATTCCAACGCTGCCATCGTTCACCATGGTTGA 2376 0.4996 MASEMEVHTTAHNSAGAGDYHLRFPRQSSVVASSLLSTVDKAAAAAAASSSNNSKYNSYHCKSGSRDNVPIPNPTTVTLSNNYSTTTLLPSSTNLTTVTSPSYTNRHCGENLSLLHLQAFQPQTQQDPSPPTPAVCGFSGLPLFPSESNRVDNTGNSTAAAVDGIASVATNADASRPSCTSSSMEDSSALAWIDGILKDLIHGSTAVSIPQLINNVREIIYPCNPNLAVILEYRLRLLTSANTTESVLTYGDKKRTEPPPPPPMVPVAAVGLNQRPFGQQVVGPSFAAIAPNLHIPNSSIVSPSVGNNMYSNWGLPPTMTALTHDGANHPSVITLPLSPLSSSNHQGHSPQEEQQFHEKEQENQNQQQEEGVSVSSPSDNNRTAVTTAAAVGGAAAEIMLAKKKKEEMQQQKRDEEGLHLLTLLLQCAEAVAADNFDEANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLINSCLGIYATLPMIPHSQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREGRVHIIDLDIMQGLQWPGLFHILASRAGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVADKVGNLDPEKLCVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGELKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWRPSFHNNSNAAIVHHG 791
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02028 791 Pfam GRAS domain family 421 776 IPR005202 -
Accr3g02028 791 MobiDBLite consensus disorder prediction 322 382 - -
Accr3g02028 791 MobiDBLite consensus disorder prediction 351 365 - -
Accr3g02028 791 MobiDBLite consensus disorder prediction 1 20 - -
Accr3g02028 791 Coils Coil 349 369 - -
Accr3g02028 791 ProSiteProfiles GRAS family profile. 411 776 IPR005202 -
Accr3g02028 791 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 372 771 IPR005202 -
Accr3g02028 791 MobiDBLite consensus disorder prediction 366 382 - -
Accr3g02028 791 Coils Coil 398 418 - -
Accr3g02028 791 MobiDBLite consensus disorder prediction 334 350 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr3g02028 Accr-Chr3 31043805 31046331 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02028 383 777 GRAS Transcription Factor Family AT3G54220 83.709 0.0 671
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g02028 GRAS 6.1e-123 CL0063
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02028 - - gmx:100806779 849.736