Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02027 ATGGTGAGAAAGAGAATGGCTTCTGAAATGGAAGTTCACACCACAGCCCATAACTCCGCCGGCGCCGGAGATTATCATCTCCGGTTTCCCCGTCAGAGTAGTGTGGTGGCTTCCTCCCTATTATCCACCGTAGATAAAGCAGCAGCAGCAGCAGCAGCTTCAAGTAGTAATAACAGTAAGTATAATAGCTATCATTGTAAATCTGGCTCACGCGATAATGTTCCTATTCCTAACCCCACAACAGTGACTCTCTCCAACAACTACTCCACTACCACTCTTCTACCTTCTTCCACTAATCTCACCACCGTGACGTCACCCAGCTATACCAACCGTCACTGCGGTGAAAACCTCTCTCTTCTTCATCTTCAAGCCTTTCAACCTCAGACCCAGCAGGACCCTTCGCCTCCTACTCCTGCGGTGTGTGGATTTTCTGGCTTGCCTTTATTTCCTTCTGAAAGTAATCGGGTTGATAATACCGGTAACAGTACTGCTGCGGCCGTCGACGGTATTGCTTCGGTGGCCACAAACGCCGACGCCAGCCGACCTTCTTGTACCTCATCTTCTATGGAGGATAGTTCAGCTTTGGCTTGGATCGACGGCATCTTGAAGGATCTCATCCATGGCTCCACCGCCGTGTCCATCCCGCAACTCATCAACAACGTTAGGGAGATTATTTATCCTTGTAATCCCAACCTCGCTGTCATTCTTGAATACAGACTCCGCCTCCTCACTTCCGCCAATACTACTGAATCTGTTCTAACTTATGGTGATAAGAAGAGGACGGAACCGCCGCCTCCTCCTCCGATGGTGCCGGTGGCGGCCGTGGGTTTAAACCAGAGGCCTTTTGGTCAGCAAGTAGTAGGCCCCTCTTTTGCCGCCATAGCTCCCAACTTGCATATTCCAAACTCTTCCATTGTTTCTCCATCTGTTGGGAACAATATGTACTCAAATTGGGGACTACCACCTACGATGACGGCCTTAACCCATGACGGCGCCAACCACCCGTCGGTGATTACCTTACCACTATCACCACTATCATCGTCAAATCATCAAGGTCATTCGCCACAGGAAGAGCAACAATTTCACGAGAAAGAACAAGAGAATCAGAACCAGCAACAAGAAGAGGGGGTTTCCGTTTCTTCCCCTTCTGATAATAATCGAACAGCAGTAACAACGGCCGCGGCAGTGGGCGGCGCAGCTGCAGAAATCATGCTAGCGAAAAAGAAGAAAGAGGAGATGCAGCAACAGAAGAGAGACGAAGAAGGCTTACACCTTCTAACTTTGCTGCTTCAGTGTGCGGAGGCTGTGGCGGCTGATAACTTCGATGAAGCCAATAAAATGTTGCTGGAGATTTCACAACTCTCCACACCGTTCGGCACGTCGGCGCAGCGGGTGGCGGCGTATTTCTCGGAAGCCATTTCTGCGAGGCTGATTAACTCATGCTTGGGAATATACGCTACTCTTCCAATGATTCCTCATAGCCAAAAGATGGTATCAGCTTTCCAAGTTTTCAATGGGATTAGTCCTTTCGTCAAGTTCTCACACTTCACAGCGAATCAAGCTATACAAGAAGCTTTCGAGAGGGAAGGGAGGGTACACATCATAGATCTGGACATAATGCAAGGATTACAATGGCCTGGCTTGTTTCACATTCTGGCTTCAAGAGCTGGTGGACCCCCTTACGTCAGGCTTACGGGGCTTGGCACCTCCATGGAAGCTCTTGAAGCTACGGGCAAGAGGTTGTCTGATTTTGCAAATAAATTGGGACTTCCTTTTGAGTTCTTTCCGGTGGCCGACAAAGTTGGGAATCTTGACCCTGAGAAATTATGTGTAAGCAAGACAGAAGCTGTGGCCGTCCACTGGCTCCAACATTCCCTTTATGATGTCACTGGCTCTGATACTAATACTTTGTGGCTTTTGCAAAGGTTGGCACCTAAAGTGGTGACGGTGGTGGAGCAGGATCTGAGCCATGCGGGGTCATTCTTAGGGAGGTTTGTGGAAGCCATACATTACTACTCAGCACTATTTGATTCTCTGGGATCAAGCTATGGGGAGGAGAGTGAGGAGAGACACGTGGTGGAGCAGCAGCTCCTGTCGAGGGAGATTCGAAACGTGCTGGCTGTCGGAGGTCCGTCGAGGACCGGCGAGCTCAAGTTCCATAACTGGCGGGAGAAGCTTCAGCAATGTGGGTTCCGAGGTATCTCCCTCGCCGGAAACGCCGCCACGCAAGCGAGCCTTCTTCTCGGCATGTTCCCTTCCGATGGGTATACCTTGGTGGAAGATAATGGCACACTCAAACTTGGTTGGAAAGATCTCTGCTTGCTTACTGCTTCTGCTTGGAGACCTTCCTTCCATAATAATTCCAACGCTGCCATCGTTCACCATGGTTGA 2391 0.499 MVRKRMASEMEVHTTAHNSAGAGDYHLRFPRQSSVVASSLLSTVDKAAAAAAASSSNNSKYNSYHCKSGSRDNVPIPNPTTVTLSNNYSTTTLLPSSTNLTTVTSPSYTNRHCGENLSLLHLQAFQPQTQQDPSPPTPAVCGFSGLPLFPSESNRVDNTGNSTAAAVDGIASVATNADASRPSCTSSSMEDSSALAWIDGILKDLIHGSTAVSIPQLINNVREIIYPCNPNLAVILEYRLRLLTSANTTESVLTYGDKKRTEPPPPPPMVPVAAVGLNQRPFGQQVVGPSFAAIAPNLHIPNSSIVSPSVGNNMYSNWGLPPTMTALTHDGANHPSVITLPLSPLSSSNHQGHSPQEEQQFHEKEQENQNQQQEEGVSVSSPSDNNRTAVTTAAAVGGAAAEIMLAKKKKEEMQQQKRDEEGLHLLTLLLQCAEAVAADNFDEANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLINSCLGIYATLPMIPHSQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREGRVHIIDLDIMQGLQWPGLFHILASRAGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVADKVGNLDPEKLCVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGELKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWRPSFHNNSNAAIVHHG 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02027 796 Pfam GRAS domain family 426 781 IPR005202 -
Accr3g02027 796 MobiDBLite consensus disorder prediction 57 78 - -
Accr3g02027 796 ProSiteProfiles GRAS family profile. 416 781 IPR005202 -
Accr3g02027 796 MobiDBLite consensus disorder prediction 371 387 - -
Accr3g02027 796 Coils Coil 403 423 - -
Accr3g02027 796 MobiDBLite consensus disorder prediction 339 355 - -
Accr3g02027 796 MobiDBLite consensus disorder prediction 327 387 - -
Accr3g02027 796 MobiDBLite consensus disorder prediction 356 370 - -
Accr3g02027 796 Coils Coil 354 374 - -
Accr3g02027 796 MobiDBLite consensus disorder prediction 1 25 - -
Accr3g02027 796 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 376 776 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02027 Accr-Chr3 31043790 31046331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02027 388 782 GRAS Transcription Factor Family AT3G54220 83.709 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr3g02027 GRAS 6.2e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02027 - - gmx:100806779 858.981