Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02022 ATGAATACCAATAATACGGAGGAGGCAAAACATGAAGGCGAGGAGGCACTTGGCGGGGTGACCGGTGAAAGGGGAGGAGGCGCGGCGGCGTCGGAGGAGGTAGTTCTGAAGAAAGGACCATGGACGGCGGCGGAGGACGCAGTTCTGGTAGAGTACGTGACGAAGCATGGAGAAGGGAACTGGAATGCAGTACAGAGAAATACAGGACTAGCTCGCTGTGGCAAGAGTTGTAGGCTGAGATGGGCAAACCATTTGCGACCCAATTTGAAAAAAGGTGCCTTTTCTTCTGAGGAAGAGAAGCTCATCCTGGAACTTCATGCACAATATGGTAACAAATGGGCCCGCATGGCTTCTCTGTTACCAGGGCGTACGGACAATGAAATCAAGAATTATTGGAACACAAGAGTGAAGCGCCGTCAACGACAAGGCCTGCCTCTTTACTCCGATGAACCTGATCGTTCCAACGTCGCCACTCCTCCTCCTAATAATGCCTCACATCAGTTTGAGTTCCTTCATCACCATCACTATCAGCATGCTTTGCCTTCTCCTTCTCCACAACCCCAATATTCTCCTCTTTCGTCCCCACTTCAGCCGAAGCCCGCCATTTCTGACCCCATGATCCCTCTTTCTTCTCCTTCTTCTTCTGTCACTTCCTCCCATTCCTTCATCTTCAGCCGCCCCGCCCCGCTTCTCTCTAACCCTCTCAACTTCAAGCGATTCCGTACTTCTACAGGTTTTCCCCTCCGGGTCGCCCCAAATACTATTGTAACCTCTTCTTCGCTTCCAGGTCAGCCCATGACGCCGCCGCCTCAGTCGTCGATCGGGTTTTCTCGATTCGGATATACGGGTCAAGTTAACTCGGGTTTGTCCCATAATATTTATCAAGCTCCTTTGTTAGAGTATGATAATCGAGGAGGGGCTTTGAACCAATTTGGGAATCCCCCACCAAAACTACTTGAGCTCTCTTCAAACCAATTTTCCCCTCATCACCAGCCTAATAATAACATTATGCAGACAGAGAGTAATAAGTTTAACATGCAAATGAACCATACTGATGATCGTATGAAGAACAGTTGTGGTGGTCGTGATGGTGGTAATAACAATGGATTTCTGGGAGATCATTTCTATGAAGTTCAGAGTTTGACACCTGGCCACCAAGCGGCACTGAAGAAACGAAGTTATTTCTATACAGATGAAGGAAATGATCTTGACGGACACCGTGGCTTTGATGATTTGCCTCTTAACTCTTCTAACTGGCCTTCAAATAATGCAGAACTGAAACTGAAGGAAGAAGCACAATACATGAGTAAATCCATGAATGACGACATATCTTCGATGATGGACGTTATGCCATCTTCACTGTCGGTTTCAGATTGGCCAGCCAGCAATGCTACGGAAGCTTCTAATAATAATTTTCAATCTTCTGACGTTATTATTCCAGACGATAACTTTGGACTTGACTCTAAACCCATTGCTTCTTTGTTTCCCACCTCAACCACTACAACAAATCACAATGACAACTCTGGATGTTACTCTTGGGACGACTTACCAGGATTTTGCTGA 1563 0.4677 MNTNNTEEAKHEGEEALGGVTGERGGGAAASEEVVLKKGPWTAAEDAVLVEYVTKHGEGNWNAVQRNTGLARCGKSCRLRWANHLRPNLKKGAFSSEEEKLILELHAQYGNKWARMASLLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDEPDRSNVATPPPNNASHQFEFLHHHHYQHALPSPSPQPQYSPLSSPLQPKPAISDPMIPLSSPSSSVTSSHSFIFSRPAPLLSNPLNFKRFRTSTGFPLRVAPNTIVTSSSLPGQPMTPPPQSSIGFSRFGYTGQVNSGLSHNIYQAPLLEYDNRGGALNQFGNPPPKLLELSSNQFSPHHQPNNNIMQTESNKFNMQMNHTDDRMKNSCGGRDGGNNNGFLGDHFYEVQSLTPGHQAALKKRSYFYTDEGNDLDGHRGFDDLPLNSSNWPSNNAELKLKEEAQYMSKSMNDDISSMMDVMPSSLSVSDWPASNATEASNNNFQSSDVIIPDDNFGLDSKPIASLFPTSTTTTNHNDNSGCYSWDDLPGFC 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02022 520 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 140 IPR017930 -
Accr3g02022 520 ProSiteProfiles Myb-like domain profile. 86 136 IPR001005 -
Accr3g02022 520 Gene3D - 93 178 - -
Accr3g02022 520 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 19 473 - -
Accr3g02022 520 CDD SANT 40 85 IPR001005 -
Accr3g02022 520 Gene3D - 37 90 - -
Accr3g02022 520 MobiDBLite consensus disorder prediction 1 29 - -
Accr3g02022 520 MobiDBLite consensus disorder prediction 142 201 - -
Accr3g02022 520 SMART sant 90 138 IPR001005 -
Accr3g02022 520 SMART sant 37 87 IPR001005 -
Accr3g02022 520 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Accr3g02022 520 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Accr3g02022 520 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 85 IPR017930 -
Accr3g02022 520 FunFam MYB-related transcription factor 37 90 - -
Accr3g02022 520 CDD SANT 93 134 IPR001005 -
Accr3g02022 520 FunFam Transcription factor GAMYB 93 139 - -
Accr3g02022 520 SUPERFAMILY Homeodomain-like 37 132 IPR009057 -
Accr3g02022 520 ProSiteProfiles Myb-like domain profile. 33 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02022 Accr-Chr3 30642392 30645352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02022 25 237 MYB Transcription Factor Family AT4G26930 54.378 3.57e-65 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr3g02022 Myb_DNA-binding 1.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02022 - - lja:Lj6g3v0869180.1 390.963