Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g02019 ATGGCTTCTGCTTCTTCAAGCTCTGGCCCTGCGCCAAATGCTCCAAGAAAGAATGATGTGTTTATTAGTTTTAGGGGCGAAGACACGCGCTACAACTTCACTAGCCATCTTCATGCTGCTCTCAACGGAGCTTTACTTAAGGTCTTTCGTGACGATAAGAATCTTGAGAAAGGCGATGAAATCAAACCATCACTCATTCAAGCAATCAAGGATTCAAGTGTATCTGTAATAGTCTTCTCAAAAGACTATGCTTCCTCAAAATGGTGCCTGGATGAACTCCACCAGATCGTGCAATACAGAAAGGATGAGGGCCAGTATTTGATACCCATCTTCTACAAAGTTGACCCCACAGATGTTCGACACCAAACTGGAGCTTATGAGGAGGCATTTGAAAAATATGATAAAAATTCCGAACTTCATCCAGACAGGGTGAACGGATGGAGAGCTGCTCTTTCTGAAGCTGGCCAATTAAGCGGCTTCCACTGCCAAACCTCCACGGACGAATCCAATTTAATTAAGGACATTGTCACTCATGTCGACAAAAAATTGAAATGTTTATATAATTGTCAAGTTACATTAAAGGATGCAATTGGAATTGATGAAACGATTAAACCCATTGAAGAGTTATTGGAAAAATCAGACAAAGTTGGAATTTGGGGGATGGGTGGTCTGGGTAAGACCACAATGGCAAAGGCTTTGTTTGCCAAGTTATCTTTTCGGTATCACAATTGCTGCTTCTTGGAAAATATAAGGGAAGCAATAGCAAGATCTGGATCAAAAGATGTATGTAACTCTCTTGTCTCTGGGCTGCTGGGTCCAAATACGCACAATAATTCATCAAATGCTTTTGGAAGAACTGGATTTTTAGACGCAAAGCTTCGTCATATAAAAGCTTTCGTTGTGCTTGATGATGTCGAGAGTTCTGAGCAATTAGAGGATCTGAAGGAGTTATGCGATGTCTTGGGAGAAGGCAGTAAAGTTATTATTACAACAAGAGATATGAGATTGCTTCGGGGAAACGGTTATAATATACATGAAGCCAAGGGATTGGATTATGACAATTCACGTCGACTTTTCATCTACAAGGCCTTTGGACCAAACCATCCTGAATATGTTGGATATGAACATCTCATAGATGGGTTTGTAGATTACACTCAACACAACCCCCTAGCTTTAAAAGTCCTGGGAACATTTTTAGCTGGCTCTGTAGATGAAAAGGAATGGGATAGTTTGTTGAGAGAACTAAGAGCAGGGAATCCAGATGACCGAATTCAAAAGGTGTTAAGATTGAGTTACGATAATGGATTAAAATATAAAGAGCAGCAAATTTTTCTAGACATTGCATGTTTCTTAAAGGGTGAAAGTGAAGAATTTGTAGAAGAGCTATTGAAGAGCTATACATTCTACTCAACTATTGGCATACAAACTCTTATAGATAAGGCTCTTATCGTCAAGAGTAACGGGAAAGTTGAGATGCATGACTTACTACAAGAAATGGGTTTACAAATTGTTCGTGAAGAGAGTAAGGAGGAACCTGGAAAAAGGAGTAGATTATGGGATCCTAGTGAAATATATGATGTATTGAAAAATTGTGAGGGGGAAAAAGAGGTTCAAGGCATAATGTTTGAAATATCTAGGAGTAGACCTTTAAAATTGACTGCAAAGGCCTTCAATGAAATGAAGAGAATAAGATTTCTCAAATTTTATTCAAGTAATGGTATGGTGACTATTCCAACAAGTCTTGAGTTAATTTCTACCAAAATAAGGTATTTCCATTGGGAAGGATACCCGGGGAAGTCCTTGCCATCAAATTTTTGTGCAGAGCTTCTTCTTGAACTTAACTTGAAAGAAAGCATGGTTGAAACACTTTGGGAAGGAGTGCAGGATTTAGCGAATTTAAGAAGATTAATACTTTCGAAATGCCATAACTTGAGGAAGTTACCAGATTTATCCAAAGCTTGCAGTCTTGAAAGCGTAGATCTAAGTCATTGTGAGCGTTTACGTGATATGGATGCATCTCTCCTATTAAACCAGAGTCTCATTTCTTTGGATTTTAGTTACTGCTCCGACCTAATAACTGAACTGCCCGTTAGTCTGAGGCATCTTTCAAAGCTACAATATCTTTCTGTAAAAGGCTGTACTGCGCTTCGGAGTCTACCGGAACTTCCTCCCTCCTTTAGAAAATTGATTGCTACAGACTGCACATCTTTGGAGAATGTGAGCATTGCAAAGAGGTTTTTATTCACCAAGCCAAGTGAGGAACAAGCCAAGGGCTCGTTACTGAAAGCAGATCATGAGAAGGAACGGGTTACAGTTTCTTACAGTTTCTTGCCCGAGATGATTCGGATACCTTCAATCTTTCTTTAG 2367 0.3942 MASASSSSGPAPNAPRKNDVFISFRGEDTRYNFTSHLHAALNGALLKVFRDDKNLEKGDEIKPSLIQAIKDSSVSVIVFSKDYASSKWCLDELHQIVQYRKDEGQYLIPIFYKVDPTDVRHQTGAYEEAFEKYDKNSELHPDRVNGWRAALSEAGQLSGFHCQTSTDESNLIKDIVTHVDKKLKCLYNCQVTLKDAIGIDETIKPIEELLEKSDKVGIWGMGGLGKTTMAKALFAKLSFRYHNCCFLENIREAIARSGSKDVCNSLVSGLLGPNTHNNSSNAFGRTGFLDAKLRHIKAFVVLDDVESSEQLEDLKELCDVLGEGSKVIITTRDMRLLRGNGYNIHEAKGLDYDNSRRLFIYKAFGPNHPEYVGYEHLIDGFVDYTQHNPLALKVLGTFLAGSVDEKEWDSLLRELRAGNPDDRIQKVLRLSYDNGLKYKEQQIFLDIACFLKGESEEFVEELLKSYTFYSTIGIQTLIDKALIVKSNGKVEMHDLLQEMGLQIVREESKEEPGKRSRLWDPSEIYDVLKNCEGEKEVQGIMFEISRSRPLKLTAKAFNEMKRIRFLKFYSSNGMVTIPTSLELISTKIRYFHWEGYPGKSLPSNFCAELLLELNLKESMVETLWEGVQDLANLRRLILSKCHNLRKLPDLSKACSLESVDLSHCERLRDMDASLLLNQSLISLDFSYCSDLITELPVSLRHLSKLQYLSVKGCTALRSLPELPPSFRKLIATDCTSLENVSIAKRFLFTKPSEEQAKGSLLKADHEKERVTVSYSFLPEMIRIPSIFL 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g02019 788 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Accr3g02019 788 SMART till_3 17 157 IPR000157 GO:0007165
Accr3g02019 788 Gene3D - 13 185 IPR035897 -
Accr3g02019 788 SUPERFAMILY "Winged helix" DNA-binding domain 422 529 IPR036390 -
Accr3g02019 788 PRINTS Disease resistance protein signature 385 399 - -
Accr3g02019 788 PRINTS Disease resistance protein signature 292 306 - -
Accr3g02019 788 PRINTS Disease resistance protein signature 215 230 - -
Accr3g02019 788 PRINTS Disease resistance protein signature 628 644 - -
Accr3g02019 788 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 160 IPR035897 -
Accr3g02019 788 Gene3D - 350 435 IPR042197 -
Accr3g02019 788 Pfam TIR domain 19 184 IPR000157 GO:0007165
Accr3g02019 788 Gene3D Ribonuclease Inhibitor 542 745 IPR032675 -
Accr3g02019 788 SUPERFAMILY L domain-like 541 741 - -
Accr3g02019 788 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Accr3g02019 788 Gene3D - 186 343 IPR027417 -
Accr3g02019 788 Pfam NB-ARC domain 208 432 IPR002182 GO:0043531
Accr3g02019 788 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 734 IPR044974 GO:0006952
Accr3g02019 788 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g02019 Accr-Chr3 30559028 30562254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g02019 10 729 WRKY Transcription Factor Family AT4G12020 30.728 4.45e-80 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g02019 - - pcin:129288608 637.876