Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01999 ATGAAGAAATCTTCCGCTTCGCATTATCAACGGCTCGTGTTTTGCATTTTTTGCTTCTCTTTGCTTTTGCTGGTGCCGAGGGTTTCTTCAAGCTCACCACCTACTCAACACTCTAATCATGGTAGTTCAGATTCAACCGAGGGAAGAACTTTGAGGCAGGAGCAGGGTTCTCATGAAATACATTGTTCTAGAGAAAGAAGTAGAGCAGCTTGGAAGATCGTCGAGGAGTATTTGATGCCGTTTGTGGAGAAGGAAAAATATCAAATCACAAAAAGATGCAGGCTTCACCCTGATAATGATCTATATAGAGATCAGGAGCAACATAAGTCTCATATAGATATCAATGAATGGCAGTGTGGATACTGCAAAAAAAGTTTCTATGAAGAGAAAAATCTTGATCTGCATTTTGACAACAGACACTCCAATTTACTAGATCTGAGTCAACGGAAGTGTTTGGCAGATGTATGTGGAGCATTGCACTGTGACCAAATAACGAATTCAGGGGGAACAAAGTCAAAATGCAATCCTGCTGCAGCTGCAAGGAATAAACATCTATGTGAGAGCTTAGCTGATAGTTGCTTTCCAGTTAGTGAAGGCCCTGCAGCAGGCCGAATTCATGAATTCTTCTTGCGCCAATTCTGTGATGCTCATACCTGCACTGGAAGGCAAAAACCCTTCTCTAGAGGCCGTAGGAAGAAGATGAATGTGTTATACCTTGTCGTCTCCATTTTAGTAGTGATGATGCTTATACTTTTCTATCTCTACGTTTTCTTGTATCAAAGAGGGATGAAAAGAGGCACTCAAGTGCTGCGACGCATCTCACAGACGAACCGAAAGAAAAAGCCCTCTTGA 852 0.4202 MKKSSASHYQRLVFCIFCFSLLLLVPRVSSSSPPTQHSNHGSSDSTEGRTLRQEQGSHEIHCSRERSRAAWKIVEEYLMPFVEKEKYQITKRCRLHPDNDLYRDQEQHKSHIDINEWQCGYCKKSFYEEKNLDLHFDNRHSNLLDLSQRKCLADVCGALHCDQITNSGGTKSKCNPAAAARNKHLCESLADSCFPVSEGPAAGRIHEFFLRQFCDAHTCTGRQKPFSRGRRKKMNVLYLVVSILVVMMLILFYLYVFLYQRGMKRGTQVLRRISQTNRKKKPS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01999 283 ProSitePatterns Zinc finger C2H2 type domain signature. 119 140 IPR013087 -
Accr3g01999 283 ProSiteProfiles Zinc finger C2H2 type domain profile. 117 142 IPR013087 -
Accr3g01999 283 MobiDBLite consensus disorder prediction 31 63 - -
Accr3g01999 283 MobiDBLite consensus disorder prediction 31 50 - -
Accr3g01999 283 PANTHER ZINC FINGER PROTEIN-RELATED 14 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01999 Accr-Chr3 29954923 29958166 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01999 36 283 C2H2 Transcription Factor Family AT5G63280 62.151 7.75e-111 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr3g01999 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01999 - - lang:109338698 424.476