Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01993 ATGCGGAGCACCACCGCGAGGACCGGTGGGGCGTTCTTGACGTTTATTAAGTCACTGTCGCTTTCGACCAGGAGTCAGCAGGAACACTCTTCGGCTAAGAAGCTGGGTTCTTACCTTGTTCAGACACAATTTCAGTTTGGCTTACAAGTTCCAGGTCCTCGTTCATATTGCACTGCAAATGTTGTTGATGTTGGACAGCCAACTCCTGCATCTCATCCGCAGTTACTGAAAGATGGAGAGATCACACCTGGCATAACTGCAGAGGAATACATCCTAAGGAGAAAAAAGTTGTTGCAGCTTCTTCCTGAGAAGAGTTTGGCCATCATTTCAGCTGCCCCTGTAAAGATGATGACTGATGTTGTGCCTTATACATTTCGACAAGATGCTGACTATTTATATATCACAGGCTGCCAACAACCAGGCGGTGTGGCAGTTTTAGGTCATGAGTGTGGTCTATGCATGTTCATGCCTGAAGCTAAGTCTCATGATGTAATTTGGCAAGGGCAAATAGCTGGAGTTGATGCAGCACTAGACACGTTCAAGGCTGATGTGGCATATCCTATGAGGAAATTGCATGAGATTCTTCCAGATATGTTAAGAGGATCCTCAAAATTGTTTCACAATGTTCAGACTGCAATTCCAGCATATACGAAACTGGAAGCCTTCCAAGAGCTATTATTTTCTAACAATGTAAAGGATCTATCTATTTATACCCATCAGCTACGGTGGATAAAGTCACCTGCTGAGATCAAGTTAATGAAGGAATCTGCATCAATTGCATGCCAGGCACTTCTGTTGACAATGTTGCACTCGAAGATGTACCCTTTTGAAGGTATGCTGGCTGCAAAGGTTGAATATGAATGCAAAATGAGAGGTGCTCAGCGAATGGCGTTCAATCCTGTGGTTGGTGGTGGACCTAACGGAAGTGTTATACATTATTCTAGGAATGATCAAAAAATTGAAGATGGTGATCTTGTTTTGATGGATGTTGGTTGTGAGTTGCATGGATATACCAGTGATCTTACCCGAACTTGGCCACCTTGTGGTAGCTTTTCTTCTGCCAAGGAAGAGCTCTATGAGCTTATATTGGAAACAAACAAGCAGTGTGTGGAACTTTGTAAACCTGGTGCTAGTATTCAGCAAATACATGATCATTCGGTTGAAATGCTTCAGAAAGGACTCAAGGAGATTGGAATTTTGAGAGGGGTTCCAAGCCGTGCCTACCATACACTGAACCCTACTTCTATAGGTCACTACTTAGGAATGGATATTCATGATTGTTCAAGGATTAACTATGACTGTCCTCTGAAGCCAGGTGTTGTCATAACTATTGAACCAGGAGTATACATCCCATCTCATTTTGATGGTCCCGAGAGGTATCGAGGCATTGGGATAAGAATTGAGGATGAGGTTCTCATCACGGAAACAGGTTATGAGGTCCTTACAGCATCAATTCCAAAGGAAATCAAGCACATTGAATCCCTGCTAAATAACTGCAATGGAATGGGAAATGATAGCCACATTAAGATGGGAGCTACAGTGAGTTAA 1548 0.4309 MRSTTARTGGAFLTFIKSLSLSTRSQQEHSSAKKLGSYLVQTQFQFGLQVPGPRSYCTANVVDVGQPTPASHPQLLKDGEITPGITAEEYILRRKKLLQLLPEKSLAIISAAPVKMMTDVVPYTFRQDADYLYITGCQQPGGVAVLGHECGLCMFMPEAKSHDVIWQGQIAGVDAALDTFKADVAYPMRKLHEILPDMLRGSSKLFHNVQTAIPAYTKLEAFQELLFSNNVKDLSIYTHQLRWIKSPAEIKLMKESASIACQALLLTMLHSKMYPFEGMLAAKVEYECKMRGAQRMAFNPVVGGGPNGSVIHYSRNDQKIEDGDLVLMDVGCELHGYTSDLTRTWPPCGSFSSAKEELYELILETNKQCVELCKPGASIQQIHDHSVEMLQKGLKEIGILRGVPSRAYHTLNPTSIGHYLGMDIHDCSRINYDCPLKPGVVITIEPGVYIPSHFDGPERYRGIGIRIEDEVLITETGYEVLTASIPKEIKHIESLLNNCNGMGNDSHIKMGATVS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01993 515 PANTHER XAA-PRO AMINOPEPTIDASE 3 63 497 - -
Accr3g01993 515 CDD Prolidase 250 483 - -
Accr3g01993 515 Gene3D - 84 242 IPR029149 -
Accr3g01993 515 Pfam Aminopeptidase P, N-terminal domain 90 204 IPR007865 GO:0030145|GO:0070006
Accr3g01993 515 Pfam Metallopeptidase family M24 252 475 IPR000994 -
Accr3g01993 515 Gene3D Creatinase/methionine aminopeptidase superfamily 244 507 IPR036005 -
Accr3g01993 515 PRINTS Methionine aminopeptidase-1 signature 324 340 IPR001714 -
Accr3g01993 515 PRINTS Methionine aminopeptidase-1 signature 434 446 IPR001714 -
Accr3g01993 515 SUPERFAMILY Creatinase/aminopeptidase 246 497 IPR036005 -
Accr3g01993 515 FunFam Xaa-Pro aminopeptidase 3 244 501 - -
Accr3g01993 515 SMART AMP_N_2 85 214 IPR007865 GO:0030145|GO:0070006
Accr3g01993 515 SUPERFAMILY Creatinase/prolidase N-terminal domain 83 245 IPR029149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01993 Accr-Chr3 29777498 29788151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01993 1 45 Antiporters AT5G64290 66.667 4.34e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01993 K01262 - gmx:100806137 799.275