Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01976 ATGGCGAATTTGCCTCATTCTTTCCCAATGAATGTATCATATGTAGCCGTTGGCGCCTCGGCTCAAAACGCAGCCACTTCTCAGGCTAACAAGGATAAGATGGCCGCAGCGGTAGAGCATCTGGTTCTTCAACTGGGTAATCCTGAACTCCGAGAAAGTGCCCTGCATGAGCTATCTAAGAAGAGGGAGTTATTTCAAGAACTGGGAGTAGCCCCACTGTTGTGGAATTCATTTGGTACCATTGCTGTTCTTTTGCAGGAAATAGTTTCAATATACCCAGCTCTGTCACCTCCAAACCTTACTCCAATGCAATCAAATCGGGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTTGCATCTCACCCAGATACAAAGATGTTGTTCCTGAATGCCCACATACCTCTATATCTTTATCCTTTTCTTAATACAACAAGCAAATCAAAACCATTTGAGTACTTGAGGCTCACTAGTCTTGGTGTCATTGGTGCCCTGGTGAAGGTTGATGATACAAAGATTATCAGTTTTCTTCTTTCAACAGAAATAATTCCACTCTGCCTTCGCACCATGGAAATGGGCAGTGAATTGTCAAAAACAGTTGCAACATTTATAGTTCAGAAAATTCTGTCAGAAGATGTGGGCTTGGAGTATATTTGTACTACAGCTGATCGTTTCTATGCAGTTGCTCGAGTTTTGGGGAACATGGTGGCATCGCTTGCCGAGCAACCCTCATCTCGTCTGTTGAAACACATTATCTGTTGCTATGTTCGTCTGTCAGATATTCCGAGGGCTTGTGCTGCGTTAAGAAATATCCTTCCAGACCTGCTCAGGGATGCTACATTCAGTAGTTGCCTTCATGAAGATCAAACAACCAGGAGGTTGCTGCAGCAATTGCTTCAAAATGTTGACATGAGTCGCATGCAGCCGCTATAG 930 0.4398 MANLPHSFPMNVSYVAVGASAQNAATSQANKDKMAAAVEHLVLQLGNPELRESALHELSKKRELFQELGVAPLLWNSFGTIAVLLQEIVSIYPALSPPNLTPMQSNRVCNALALLQCVASHPDTKMLFLNAHIPLYLYPFLNTTSKSKPFEYLRLTSLGVIGALVKVDDTKIISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILSEDVGLEYICTTADRFYAVARVLGNMVASLAEQPSSRLLKHIICCYVRLSDIPRACAALRNILPDLLRDATFSSCLHEDQTTRRLLQQLLQNVDMSRMQPL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01976 309 Gene3D - 30 303 IPR011989 -
Accr3g01976 309 Pfam Cell differentiation family, Rcd1-like 41 301 - -
Accr3g01976 309 FunFam Cell differentiation protein RCD1 31 304 - -
Accr3g01976 309 SUPERFAMILY ARM repeat 46 290 IPR016024 -
Accr3g01976 309 PANTHER UNCHARACTERIZED 29 305 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01976 Accr-Chr3 29268328 29275991 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Accr3g01976 Rcd1 8.5e-123 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01976 K12606 - qsa:O6P43_013675 476.478