Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01969 ATGAGGAAAGGCAGAGCAGCCGCGCCGGTGAAGACGACGGCCGAGGCGGCGACTGGGGTCGACGGAGGATCTGGATCGAGGACGGTTTTAAAAGAGCCGAGGTTCCGGGGCGTGAGGAAGAGGCCATGGGGTAGATTTGCGGCGGAGATCAGAGACCCAGTGAAGAAAGCTCGTGTGTGGCTTGGCACCTTCGATTCCGCCGAAGAAGCTGCTCGAGCTTATGACGCTGCCGCTCTCAACCTCCGTGGACCTAGGGCTAAGACTAACTTTCCGATCAACCCTTCTTCTCTCTCACCCTTCTGTTACCACCACAACAATAACAACCCCACCGATCCGTTTTTGGATCACAGGTTGTATGCTTCTAATGGCTTCCAGGAGCACCAAATCAATCCTCAGAGACCTACTTCTAGCGGTATGAGCAGCACCGTCGAGTCCTTCAGCGGTCCTCGCCCTAGGTCGATTGCGCCGCCGTTGACCACCACCTCCTCCCGTAGATACCCTCGGACGCCGCCCGTTGTTCCAGAGGATTGCCACAGCGACTGCGATTCATCGTCTTCTGTGGTTGACAACGACGGCGATGATATCGCCTCCTCCTCTTTCCGGCGGTCGCTCCCCTTCGATCTAAACCTCCCACCGGTTGATGAAGATCTTCACTGCACTGATCTGCGTCTCTGA 675 0.5689 MRKGRAAAPVKTTAEAATGVDGGSGSRTVLKEPRFRGVRKRPWGRFAAEIRDPVKKARVWLGTFDSAEEAARAYDAAALNLRGPRAKTNFPINPSSLSPFCYHHNNNNPTDPFLDHRLYASNGFQEHQINPQRPTSSGMSSTVESFSGPRPRSIAPPLTTTSSRRYPRTPPVVPEDCHSDCDSSSSVVDNDGDDIASSSFRRSLPFDLNLPPVDEDLHCTDLRL 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01969 224 CDD AP2 33 93 IPR001471 GO:0003700|GO:0006355
Accr3g01969 224 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 193 - -
Accr3g01969 224 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Accr3g01969 224 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Accr3g01969 224 MobiDBLite consensus disorder prediction 127 194 - -
Accr3g01969 224 FunFam Ethylene-responsive transcription factor 2 34 93 - -
Accr3g01969 224 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Accr3g01969 224 Pfam AP2 domain 33 83 IPR001471 GO:0003700|GO:0006355
Accr3g01969 224 Gene3D AP2/ERF domain 34 93 IPR036955 GO:0003700|GO:0006355
Accr3g01969 224 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Accr3g01969 224 MobiDBLite consensus disorder prediction 127 167 - -
Accr3g01969 224 SUPERFAMILY DNA-binding domain 34 92 IPR016177 GO:0003677
Accr3g01969 224 MobiDBLite consensus disorder prediction 1 28 - -
Accr3g01969 224 MobiDBLite consensus disorder prediction 179 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01969 Accr-Chr3 28958737 28959411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01969 1 224 AP2-EREBP Transcription Factor Family AT3G20310 57.312 1.15e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr3g01969 AP2 5.8e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01969 K09286 - zju:107432807 257.299