Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01954 ATGATTATGGCGCTGCTGAATTGGATACCGGACGCTGTGAAGAATTTGGCTCATGATCAGGCACAGGTGATACCCATTTCGCTCTTCGTGGCGGTTCTGTGCCTCTGCTTGCTCATCGGTCACTTGCTCGAAGAAAACCGTTGGGTTAATGAATCCATTGTCGCTATTCTAGTTGGATGTATTGCTGGAATGATACTCTTGTTCATCACCAAGGGGAAGAGTTCTCGCATCCTTACATTCAACGAAGAACTGTTCTTCATATATCTTCTGCCGCCCATTATATTCAATGCTGGATTTCAGGTCAAGAAGAAACAGTTCTTCCACAACTTCTTGACTATCATGCTATTTGGGGTGATCGGTGTTTTTATATCAGCATCTATTATTGTATCTGGCAGCTGGTGGCTATTTCCCAAGTTAAACTTTACTGGTCTGACTATGCAAGATTATCTTGCTATAGGAACGATTTTCTCTTCAACAGATACAGTTTGTACCTTGCAGGTTCTCCATCAAGATGAAACTCCTTTATTATACAGCCTGGTCTTTGGGGAAGGAGTAGTAAATGATGCGACGTCAGTTGTTCTCTTCAATGCGGTGCAGAAGCTTAATGCTTCGAAAGTTAATGGTAGGGCACTCCATGTAATTGGAGATTTCTTGTATCTGTTCTCCACAAGCACTGTTCTAGGATTCATTGCTGGACTTATCACAGCATTCGTCCTGAAAGTCTGCTGCTTTGGTAGACATTCAAGTGTTCGTGAAATTGCATTGATGATTTTAATGGCATACCTATCCTACACGTTGGCAGAGCTTCTAGAACTCAGTGGAATCCTCACCGTTTTCTTCTGCGGAATAATAATGTCACATTATGCATGGCATAATGTGAATGAAACTTCAAGAGTCACAACCAGGCATGTCTTTGCGACAATGTCATTTATTGCAGAAACCTTTATATTTCTTTATGTGGGCATGGATGCTCTGGACATGGAGAAGTGGAGGATTACCAAATTAAGTTTTGGGAGTTTGATGGGAATTTACAGTTGCTTAATCTTCCTGATATTACTTGGGCGGGTTGCTTTTGTTTTCCCTCTCTCTGCTTTTGCCAATTGTTTAAATAGGCGTGCTCATAGAGACTCAAGAATCACATTTAGGCATCAGATTATCATTTGGTGGGCTGGACTTATGAGAGGGGCAGTCTCCATTGCTTTGGCTTTCAAACAATTCACATATTCTGGTGTTACATCTGATCCTGTTAATGCAACAATGATCACCAACACCATCATTGTTGTGCTTTTCAGCACGCTGGTGTTTGGCTTTCTCACAAAACCACTCATCCGTTATCTTCTTCCCCATAGCGCGACGAGGAAGAAAATCATCCGTCAGGAATCTGATCTTACAGCTGAGGACTTGAATCTGCCGTTGCTATCCTTAGAGGAGTCGGCGGAAACCAACATCAGCCGTGCAAAAGAAAGTCTGTCCATGTTAATGGAAAGCCCTGTATACACCATACATCATTATTGGAGGAGGTTTGATGATGCCTACATGAGACCTATATTTGGAGGCCCTCTTGCTTAG 1569 0.4238 MIMALLNWIPDAVKNLAHDQAQVIPISLFVAVLCLCLLIGHLLEENRWVNESIVAILVGCIAGMILLFITKGKSSRILTFNEELFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISASIIVSGSWWLFPKLNFTGLTMQDYLAIGTIFSSTDTVCTLQVLHQDETPLLYSLVFGEGVVNDATSVVLFNAVQKLNASKVNGRALHVIGDFLYLFSTSTVLGFIAGLITAFVLKVCCFGRHSSVREIALMILMAYLSYTLAELLELSGILTVFFCGIIMSHYAWHNVNETSRVTTRHVFATMSFIAETFIFLYVGMDALDMEKWRITKLSFGSLMGIYSCLIFLILLGRVAFVFPLSAFANCLNRRAHRDSRITFRHQIIIWWAGLMRGAVSIALAFKQFTYSGVTSDPVNATMITNTIIVVLFSTLVFGFLTKPLIRYLLPHSATRKKIIRQESDLTAEDLNLPLLSLEESAETNISRAKESLSMLMESPVYTIHHYWRRFDDAYMRPIFGGPLA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01954 522 Gene3D - 144 197 - -
Accr3g01954 522 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr3g01954 522 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr3g01954 522 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr3g01954 522 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr3g01954 522 NCBIfam sodium/hydrogen exchanger 3 25 460 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Accr3g01954 522 PANTHER SODIUM/HYDROGEN EXCHANGER 18 517 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Accr3g01954 522 Pfam Sodium/hydrogen exchanger family 29 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01954 Accr-Chr3 28455482 28470385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01954 14 520 Antiporters AT5G55470 72.211 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01954 - - gmx:100813332 838.18