Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr3g01950 ATGCCTGATCGAGAAATTTGCACTTCAATGAAGGAACCTCGAGTTGTTGCGAGGAAATTCCTGGCCAGGCCTCAGCGTGAAGGCGTTGGCGCTGTTGTTAGAAGAAGCATCGGACGGTTTGAGCTCAAGTACTTTGATCCTTTTCTGCTGTTGGATGAATTTTCAGCTTCTGCTCCAGCTGGCTTCCCTGATCATCCACATAGAGGGTTTGAGACAGTGACATATATGTTGCAGGGAGCTATAACACATGAGGATTTTGAAGGGCACAAAGGAACGATTGAAGCAGGTGACTTGCAGTGGATGACTGCAGGGAGAGGAATAGTTCACTCAGAGATGCCTGCATCACAAGGAATTCAAAAGGGCCTTCAGCTTTGGATCAATCTTGCTTCCAATCATAAAATGATTGAGCCAAGGTATCAAGAGATGTTAAGCAAGGACATAGCAGAAGTAGAGAAAGATGGAATCAAAGTAAGGGTTATAGCAGGAGAAGCCTTAGGAACAAAGTCTCCAATCCAAACAAGGACTCCAACAATGTACTTGGATTTCTCCCTTAAACCTGGGGCCCACTTGCAGCAACCTATTCCAAAGTCATGGAATGCTTTCGTCTATGTTTTGGAAGGAGAAGGTGTGTTTGGGAACATGAAATCTCAGCCTGTCTCTTCACACCATATTCTTCTTCTTGGTCCAGGAGATGGGCTTGAGGTATGGAACAAGTCTTGTAATAATAACAAAGTGCTTAGGTTTGTACTCGTTGGAGGCCAACCATTGGGTGAACCAGTGGCTCAGTTTGGACCCTTCGTGATGAACACTCAAGAAGAGATTGACCAAACCATTGATGATTTTGAGAATTGTGTCAATGGGTTTGAGAAAGCTAGACATTGGAAGTCTGAAGCTGCAATTACTCTGGATTTTTAA 915 0.4415 MPDREICTSMKEPRVVARKFLARPQREGVGAVVRRSIGRFELKYFDPFLLLDEFSASAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPASQGIQKGLQLWINLASNHKMIEPRYQEMLSKDIAEVEKDGIKVRVIAGEALGTKSPIQTRTPTMYLDFSLKPGAHLQQPIPKSWNAFVYVLEGEGVFGNMKSQPVSSHHILLLGPGDGLEVWNKSCNNNKVLRFVLVGGQPLGEPVAQFGPFVMNTQEEIDQTIDDFENCVNGFEKARHWKSEAAITLDF 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr3g01950 304 PANTHER PIRIN-RELATED 8 298 IPR012093 -
Accr3g01950 304 PIRSF Pirin 12 295 IPR012093 -
Accr3g01950 304 CDD cupin_pirin_N 31 128 - -
Accr3g01950 304 Pfam Pirin C-terminal cupin domain 179 286 IPR008778 -
Accr3g01950 304 CDD cupin_pirin_C 176 255 - -
Accr3g01950 304 FunFam pirin 27 164 - -
Accr3g01950 304 Gene3D Jelly Rolls 148 256 IPR014710 -
Accr3g01950 304 Pfam Pirin 33 126 IPR003829 -
Accr3g01950 304 Gene3D Jelly Rolls 27 282 IPR014710 -
Accr3g01950 304 SUPERFAMILY RmlC-like cupins 14 296 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr3g01950 Accr-Chr3 28346477 28351836 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr3g01950 13 292 Calmodulin-binding Proteins AT3G59220 59.075 1.10e-127 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr3g01950 K06911 - gmx:100790637 546.969